RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 PROKR2Q8NFJ6 384 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR9Q2Q8NGE9 314 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR52E2Q8NGJ4 325 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR5L1Q8NGL2 311 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR2T29Q8NH02 315 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 KLF14Q8TD94 323 aaPredicted RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 MARS2Q96GW9 593 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 CLPTM1LQ96KA5 538 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TSSK2Q96PF2 358 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 SNX18Q96RF0 628 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 DCLRE1CQ96SD1 692 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 TSSK6Q9BXA6 273 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 OR2J1Q9GZK6 312 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 SHARPINQ9H0F6 387 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 EGLN3Q9H6Z9 239 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CHODLQ9H9P2 273 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 TBC1D23Q9NUY8 699 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 MYEF2Q9P2K5 600 aaKnown RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 LPAR3Q9UBY5 353 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CGGBP1Q9UFW8 167 aaPredicted RBP5.46□□□□□ -1.54
TCF4-249ENST00000625716 KCNS2Q9ULS6 477 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 B9D1Q9UPM9 204 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 BAIAP2Q9UQB8 552 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 LYVE1Q9Y5Y7 322 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 CDH10Q9Y6N8 788 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 U3KQV3 271 aa5.46□□□□□ -1.54
TCF4-249ENST00000625716 A0A096LNT2 108 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 IGHV4-61A0A0C4DH41 118 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 IGHV1-69-2A0A0G2JMI3 117 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 DHRS12A0PJE2 317 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 LRP5LA4QPB2 252 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 OR6C6A6NF89 314 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 AQP12BA6NM10 295 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 H3BN98 237 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 RER1O15258 196 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 SPRY3O43610 288 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 LMX1BO60663 402 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 CDC14BO60729 498 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 E2F6O75461 281 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 DNAJC8O75937 253 aaPredicted RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 GPANK1O95872 356 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 NGFP01138 241 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 IFNGP01579 166 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 TACSTD2P09758 323 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ZNF16P17020 682 aaPredicted RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 PCMT1P22061 227 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 MPV17P39210 176 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 MAGEA2P43356 314 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 MAGEB1P43366 347 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 RASSF2P50749 326 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 COX10Q12887 443 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 PPP1R8Q12972 351 aaKnown RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 ECH1Q13011 328 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 RIN1Q13671 783 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 FLOT2Q14254 428 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 MEP1BQ16820 701 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 HFEQ30201 348 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ELFN2Q5R3F8 820 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 RASSF6Q6ZTQ3 369 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 RFPL4BQ6ZWI9 263 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 PEG10Q86TG7 708 aaKnown RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 SPATA24Q86W54 205 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 HIPK1Q86Z02 1210 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 AQP12AQ8IXF9 295 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 OR6V1Q8N148 313 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 LINC01356Q8N9X3 169 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 AQP11Q8NBQ7 271 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 SDR9C7Q8NEX9 313 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 OR2T33Q8NG76 320 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 OR2T4Q8NH00 348 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 TEX47Q8TBZ9 253 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 GIPC3Q8TF64 312 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 IPCEF1Q8WWN9 437 aaPredicted RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 RAB1CQ92928 201 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 PTP4A1Q93096 173 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 APOBEC3DQ96AK3 386 aaPredicted RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 CMBLQ96DG6 245 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ELMOD3Q96FG2 381 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 TIMD4Q96H15 378 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 PITX2Q99697 317 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 BTBD10Q9BSF8 475 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 CHID1Q9BWS9 393 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 TEX12Q9BXU0 123 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 DGCR6LQ9BY27 220 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 RACGAP1Q9H0H5 632 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 HDHD2Q9H0R4 259 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ZNF556Q9HAH1 456 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 SAP30LQ9HAJ7 183 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ZNF275Q9NSD4 429 aaPredicted RBP5.45□□□□□ -1.54
TCF4-249ENST00000625716 TBCCD1Q9NVR7 557 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 TMEM160Q9NX00 188 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 NKIRAS2Q9NYR9 191 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 IL20Q9NYY1 176 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ATPIF1Q9UII2 106 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 KLHL21Q9UJP4 597 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 CDC42EP3Q9UKI2 254 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 ZDHHC8Q9ULC8 765 aa5.45□□□□□ -1.54
TCF4-249ENST00000625716 CELSR1Q9NYQ6 3014 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms