RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SCRT1Q9BWW7 348 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 LGR4Q9BXB1 951 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 GPR87Q9BY21 358 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 DPEP2Q9H4A9 486 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 PELI2Q9HAT8 420 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 DNAJC4Q9NNZ3 241 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ZCCHC3Q9NUD5 404 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 TBX21Q9UL17 535 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 MMP24Q9Y5R2 645 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 GOLGA4Q13439 2230 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 SNRNP200O75643 2136 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 AGPAT2O15120 278 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ZIC2O95409 532 aaPredicted RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 AMBPP02760 352 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 RPN2P04844 631 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ACRP10323 421 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 CEBPBP17676 345 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 SRMP19623 302 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 BCKDHBP21953 392 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 GALNSP34059 522 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 BUD31P41223 144 aaPredicted RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 MNX1P50219 401 aaPredicted RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 NCBP2P52298 156 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 KLF3P57682 345 aaPredicted RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 RPS11P62280 158 aaKnown RBP eCLIP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 LASP1Q14847 261 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 PRPF38BQ5VTL8 546 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 TMEM268Q5VZI3 342 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 RPL22L1Q6P5R6 122 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 CFAP161Q6P656 301 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ANKRD16Q6P6B7 361 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 PRSS54Q6PEW0 395 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 TMEM205Q6UW68 189 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC39A5Q6ZMH5 540 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 TMPPEQ6ZT21 453 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 MTSS1LQ765P7 747 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 GALNTL5Q7Z4T8 443 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 GABRG1Q8N1C3 465 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF321PQ8N8H1 164 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 PLPP5Q8NEB5 264 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 OR14K1Q8NGZ2 314 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ZCCHC10Q8TBK6 192 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 GPR148Q8TDV2 347 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 EXTL1Q92935 676 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ZG16BQ96DA0 208 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ARSGQ96EG1 525 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 SEC22AQ96IW7 307 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 COMMD4Q9H0A8 199 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 TAF9BQ9HBM6 251 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 AHSPQ9NZD4 102 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 SEMA5BQ9P283 1151 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF346Q9UL40 294 aaKnown RBP6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 AMDHD2Q9Y303 409 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 DOCK9Q9BZ29 2069 aa6.75□□□□□ -1.33
TRIM49B-202ENST00000622138 CPSF4LA6NMK7 179 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF705GA8MUZ8 300 aaPredicted RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF432O94892 652 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC2A10O95528 541 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 TRGC2P03986 189 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CD3DP04234 171 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 GAPDHP04406 335 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CST2P09228 141 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CXCL1P09341 107 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 C8orf89P0DMQ9 161 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ST6GAL1P15907 406 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NDUFV2P19404 249 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 GDI1P31150 447 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 TLX1P31314 330 aaPredicted RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 BRS3P32247 399 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PYCR1P32322 319 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NPY4RP50391 375 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 OR12D2P58182 307 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SNRPNP63162 240 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CSNK1G2P78368 415 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 H3F3AP84243 136 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 NOGQ13253 232 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF311Q5JNZ3 666 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 COA6Q5JTJ3 125 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PLPP4Q5VZY2 271 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 RPTNQ6XPR3 784 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF765Q7L2R6 523 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC25A42Q86VD7 318 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CACUL1Q86Y37 369 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 C9orf40Q8IXQ3 194 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC35G3Q8N808 338 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ZDHHC22Q8N966 263 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 LFNGQ8NES3 379 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 OR13C2Q8NGS9 318 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 OR5K2Q8NHB8 316 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 SUN3Q8TAQ9 357 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CD300LFQ8TDQ1 290 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CORO2AQ92828 525 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF775Q96BV0 537 aaPredicted RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 RAB39BQ96DA2 213 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 FAM46AQ96IP4 442 aaKnown RBP6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 HHIPL1Q96JK4 782 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 CAPNS2Q96L46 248 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 DIRC2Q96SL1 478 aa6.74□□□□□ -1.33
TRIM49B-202ENST00000622138 PCGF1Q9BSM1 259 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms