RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 GLO1Q04760 184 aa14.1□□□□□ -0.15
NPHP4-211ENST00000622020 ZNF101Q8IZC7 436 aa14.1□□□□□ -0.15
NPHP4-211ENST00000622020 SOX7Q9BT81 388 aa14.1□□□□□ -0.15
NPHP4-211ENST00000622020 ADAM19Q9H013 955 aa14.1□□□□□ -0.15
NPHP4-211ENST00000622020 HRH4Q9H3N8 390 aa14.1□□□□□ -0.15
NPHP4-211ENST00000622020 TMED7-TICAM2A0A0A6YYA0 188 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 IGHV3-20A0A0C4DH32 117 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 KIR2DS5A0A0G2JLQ3 304 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 A0A0G2JNG1 304 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 TMEM218A2RU14 115 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 KIR2DS3K7RE56 304 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 RAB27BO00194 218 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 NSA2O95478 260 aaKnown RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 SCAND1P57086 179 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 KIR2DS5Q14953 304 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 C9orf50Q5SZB4 431 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 C1orf189Q5VU69 101 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 HLA-DQA1Q5Y7H0 255 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 FOXRED1Q96CU9 486 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 ARL5BQ96KC2 179 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 FN3KRPQ9HA64 309 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 CHMP1AQ9HD42 196 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PURGQ9UJV8 347 aaKnown RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 VDAC3Q9Y277 283 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 A0A1W2PP11 408 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 HOXC4P09017 264 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 RORAP35398 523 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PPICP45877 212 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 UNC119Q13432 240 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PABPC1L2AQ5JQF8 200 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PAQR4Q8N4S7 273 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 OR5AP2Q8NGF4 316 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 MAFIPQ8WZ33 124 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 FAM131CQ96AQ9 280 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 RRNAD1Q96FB5 475 aaKnown RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 BANF2Q9H503 90 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 ZMAT5Q9UDW3 170 aaKnown RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 KCNK7Q9Y2U2 307 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PHF3Q92576 2039 aaKnown RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 METTL21EPA6NDL7 271 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 TMEM200CA6NKL6 621 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 METTL12A8MUP2 240 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 SIGLEC6O43699 453 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 OR2T1O43869 369 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 PVALBP20472 110 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 EFNA3P52797 238 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 HSD17B7P56937 341 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 FZD2Q14332 565 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 H3F3CQ6NXT2 135 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 ASB17Q8WXJ9 295 aa14.09□□□□□ -0.15
NPHP4-211ENST00000622020 ADAT3Q96EY9 351 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 DUSP15Q9H1R2 295 aaPredicted RBP14.09□□□□□ -0.15
NPHP4-211ENST00000622020 MSGN1A6NI15 193 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 H3BML4 177 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 SULT1C2O00338 296 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 IGLV3-21P80748 117 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-211ENST00000622020 NKAPLQ5M9Q1 402 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 C1orf140Q5VVS0 124 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 OR4K17Q8NGC6 315 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 IFT22Q9H7X7 185 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 GSKIPQ9P0R6 139 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 HTR3BO95264 441 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 H2BFMP0C1H6 154 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 IGFBP3P17936 291 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-211ENST00000622020 GABRG2P18507 467 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 DLX2Q07687 328 aaPredicted RBP14.08□□□□□ -0.16
NPHP4-211ENST00000622020 AIMP2Q13155 320 aaKnown RBP14.08□□□□□ -0.16
NPHP4-211ENST00000622020 NSDHLQ15738 373 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 PRRT1Q99946 306 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 CMSS1Q9BQ75 279 aaKnown RBP14.08□□□□□ -0.16
NPHP4-211ENST00000622020 UQCC2Q9BRT2 126 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 PARP12Q9H0J9 701 aaKnown RBP14.08□□□□□ -0.16
NPHP4-211ENST00000622020 S1PR5Q9H228 398 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 TXNIPQ9H3M7 391 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 PIGMQ9H3S5 423 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 CELSR3Q9NYQ7 3312 aa14.08□□□□□ -0.16
NPHP4-211ENST00000622020 EPOPA6NHQ4 379 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 AKR1C3P42330 323 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 NPBWR1P48145 328 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 POU3F1Q03052 451 aaPredicted RBP14.07□□□□□ -0.16
NPHP4-211ENST00000622020 CCINQ13939 588 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 SGCBQ16585 318 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF260Q3ZCT1 412 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 AWAT2Q6E213 333 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 GALNTL5Q7Z4T8 443 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 ANGPTL5Q86XS5 388 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 ZNF519Q8TB69 540 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 G6PC2Q9NQR9 355 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 SLC17A5Q9NRA2 495 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 PIAS3Q9Y6X2 628 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 R4GMQ9 66 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 NUP210LQ5VU65 1888 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 TMEM150CB9EJG8 249 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 EFSO43281 561 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 CD74P04233 296 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 IGHV4-34P06331 123 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 GPR85P60893 370 aa14.07□□□□□ -0.16
NPHP4-211ENST00000622020 FLI1Q01543 452 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms