RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SMLR1H3BR10 107 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 NGFP01138 241 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ITGA5P08648 1049 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 GLI4P10075 376 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 IDH3GP51553 393 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 FOXF2Q12947 444 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 GDPD3Q7L5L3 318 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 CXorf67Q86X51 503 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 CMTM4Q8IZR5 234 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 CPT1CQ8TCG5 803 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ADAMTS17Q8TE56 1095 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 ZBTB8AQ96BR9 441 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 C4orf45Q96LM5 186 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 SDHCQ99643 169 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 NAA11Q9BSU3 229 aaPredicted RBP9.28□□□□□ -0.92
VPS11-208ENST00000621676 GPR173Q9NS66 373 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 TREM2Q9NZC2 230 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 CFAP46Q8IYW2 2715 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 KIAA1549Q9HCM3 1950 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.28□□□□□ -0.923e-7■■■■□ 25
VPS11-208ENST00000621676 ABCA1O95477 2261 aa9.28□□□□□ -0.92
VPS11-208ENST00000621676 MEIOCA2RUB1 952 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 ATXN7O15265 892 aaPredicted RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 CEACAM1P13688 526 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 P2RY4P51582 365 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 TPTEP56180 551 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 B3GALT5-AS1P59052 145 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 RAC3P60763 192 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 Q499Y3 187 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 DNM1P34Q6PK57 102 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 C5orf24Q7Z6I8 188 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 SKA3Q8IX90 412 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 PIGCQ92535 297 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 TAAR6Q96RI8 345 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 WDR12Q9GZL7 423 aaKnown RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 PBOV1Q9GZY1 135 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 C11orf54Q9H0W9 315 aaPredicted RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 FLVCR2Q9UPI3 526 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 HDGFL3Q9Y3E1 203 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 V9GY05 133 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 ITPR1Q14643 2758 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 CSMD2Q7Z408 3487 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 FAM240BA0A1B0GVZ2 78 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 ZNF208O43345 1280 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 SPRY1O43609 319 aaPredicted RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 IDH3BO43837 385 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 UPK1BO75841 260 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 ACSM4P0C7M7 580 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 HLA-DMAP28067 261 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 NR4A2P43354 598 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 CXADRP78310 365 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 SLC36A2Q495M3 483 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 TMEM81Q6P7N7 255 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 GFI1Q99684 422 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 POTEKPQ9BYX7 375 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 SLITRK2Q9H156 845 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 DDX28Q9NUL7 540 aaKnown RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 MRPS18AQ9NVS2 196 aaKnown RBP9.27□□□□□ -0.93
VPS11-208ENST00000621676 ZNF581Q9P0T4 197 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 BOLA1Q9Y3E2 137 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 KCNMB2Q9Y691 235 aa9.27□□□□□ -0.93
VPS11-208ENST00000621676 ZNF503-AS2A6NEH8 195 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 EEF1E1-BLOC1S5C9J1V9 151 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ARL6IP5O75915 188 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 IL1AP01583 271 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 IGHEP01854 428 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 CSF3P09919 207 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ZNF20P17024 532 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 BMP5P22003 454 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 TNFSF10P50591 281 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 NKAPLQ5M9Q1 402 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 C19orf48Q6RUI8 117 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 MS4A15Q8N5U1 240 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 OR8B12Q8NGG6 310 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 PARPBPQ9NWS1 579 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 MOKQ9UQ07 419 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 TMEM14AQ9Y6G1 99 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 A0A1B0GVI7 797 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 MPIG6BO95866 241 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 CD2P06729 351 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 CELA3BP08861 270 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 NPR2P20594 1047 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 SH3BGRP55822 239 aaPredicted RBP9.26□□□□□ -0.93
VPS11-208ENST00000621676 CD83Q01151 205 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 VWA1Q6PCB0 445 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ENKURQ8TC29 256 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 TMEM41AQ96HV5 264 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 FOXB1Q99853 325 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ABCG5Q9H222 651 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 MCTS1Q9ULC4 181 aaKnown RBP9.26□□□□□ -0.93
VPS11-208ENST00000621676 A6NIZ1 184 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 SERPINA2P20848 420 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 RAP1BP61224 184 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 RAP1AP62834 184 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 CDC20Q12834 499 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ZNF239Q16600 458 aaKnown RBP9.26□□□□□ -0.93
VPS11-208ENST00000621676 THEM4Q5T1C6 240 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms