RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 GLYR1Q49A26 553 aaPredicted RBP7.57□□□□□ -1.2
ALMS1-208ENST00000620466 ARIH2OSQ8N7S6 290 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 TSLPQ969D9 159 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 JAM3Q9BX67 310 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 NECAP2Q9NVZ3 263 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 PRSS37A4D1T9 235 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 E9PI62 339 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 HS3ST1O14792 307 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 CLDN1O95832 211 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 MGST1P10620 155 aaKnown RBP7.57□□□□□ -1.2
ALMS1-208ENST00000620466 MAP2K6P52564 334 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 SLC17A1Q14916 467 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 GLDNQ6ZMI3 551 aaPredicted RBP7.57□□□□□ -1.2
ALMS1-208ENST00000620466 OR4C16Q8NGL9 310 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 PIGTQ969N2 578 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 INTS12Q96CB8 462 aaKnown RBP7.57□□□□□ -1.2
ALMS1-208ENST00000620466 EMC6Q9BV81 110 aa7.57□□□□□ -1.2
ALMS1-208ENST00000620466 PCYT1BQ9Y5K3 369 aaPredicted RBP7.57□□□□□ -1.2
ALMS1-208ENST00000620466 GSTP1P09211 210 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR4E1P0C645 316 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 AADACP22760 399 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 HSF1Q00613 529 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 ZNF74Q16587 644 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 MAMSTRQ6ZN01 415 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 ST8SIA4Q92187 359 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 TIMD4Q96H15 378 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 SLC25A32Q9H2D1 315 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR2W5A6NFC9 320 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 CDC42EP2O14613 210 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 DEGS1O15121 323 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 EIF1BO60739 113 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 B3GALNT1O75752 331 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 CD27P26842 260 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 PPICP45877 212 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 TAS2R30P59541 319 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 GRB2P62993 217 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 DND1Q8IYX4 353 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 TDHQ8IZJ6 230 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 BATF2Q8N1L9 274 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 ZBTB44Q8NCP5 570 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR51E1Q8TCB6 317 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 SLAMF6Q96DU3 332 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 COX14Q96I36 57 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR11A1Q9GZK7 315 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 NXF2Q9GZY0 626 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 CHST11Q9NPF2 352 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 TAS2R5Q9NYW4 299 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 RGS11O94810 467 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR10J4P0C629 311 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 APOBEC1P41238 236 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 PPT1P50897 306 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 RNF4P78317 190 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 MRPS34P82930 218 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM196Q5HYL7 178 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 IL34Q6ZMJ4 242 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 SFTPA1Q8IWL2 248 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 DEFB123Q8N688 67 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR1S2Q8NGQ3 325 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 MRGPRX1Q96LB2 322 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 FBXO34Q9NWN3 711 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 R4GMQ9 66 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM235A6NFC5 223 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 H0Y8G0 127 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 SPINT2O43291 252 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 ZNF728P0DKX0 622 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 EIF1P41567 113 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 PRICKLE4Q2TBC4 344 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 ZNF813Q6ZN06 617 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 RELL2Q8NC24 303 aaPredicted RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 HSPB2A8KAH6 182 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 XRCC3O43542 346 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR2F2O95006 317 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OMGP23515 440 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 F2RP25116 425 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR2F1Q13607 317 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 HSPB2Q16082 182 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 CPEB3Q8NE35 698 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 C17orf47Q8NEP4 570 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR2AK2Q8NG84 335 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 OR2G2Q8NGZ5 317 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 QPCTLQ9NXS2 382 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 DNAJB12Q9NXW2 375 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 SSUH2Q9Y2M2 353 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 PYCARD-AS1I3L0S3 204 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 LINC01565O15544 149 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 HLA-DOBP13765 273 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 FOLR1P15328 257 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
ALMS1-208ENST00000620466 MYBPHQ13203 477 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 UBE3DQ7Z6J8 389 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 DPPA2Q7Z7J5 298 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 APH1AQ96BI3 265 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 CMTM3Q96MX0 182 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 FGF21Q9NSA1 209 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 CHRNA9Q9UGM1 479 aa7.56□□□□□ -1.2
ALMS1-208ENST00000620466 A0A087WUJ7 227 aa7.55□□□□□ -1.2
ALMS1-208ENST00000620466 FRG2CA6NGY1 282 aa7.55□□□□□ -1.2
ALMS1-208ENST00000620466 OR6C76A6NM76 312 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms