RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 C2orf76Q3KRA6 126 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 GLT8D1Q68CQ7 371 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 TMEM251Q8N6I4 163 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF283Q8N7M2 679 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR1J2Q8NGS2 313 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ABHD3Q8WU67 409 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ITPKCQ96DU7 683 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ADAT3Q96EY9 351 aaPredicted RBP15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 MOB1AQ9H8S9 216 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ASCL3Q9NQ33 180 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZNF319Q9P2F9 582 aa15.29■□□□□ 0.04
PCDHGC3-205ENST00000617641 A0A1B0GTI1 187 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR5H15A6NDH6 313 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 SP1P08047 785 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC6A1P30531 599 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 LHX2P50458 406 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 PLGLB1Q02325 96 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 GLYATL3Q5SZD4 288 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 AAED1Q7RTV5 226 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 MDS2Q8NDY4 140 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 OR52I2Q8NH67 350 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 CPNE4Q96A23 557 aaPredicted RBP15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC25A28Q96A46 364 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 SOX7Q9BT81 388 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 RABL2AQ9UBK7 228 aaPredicted RBP15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 CDV3Q9UKY7 258 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 RABL2BQ9UNT1 228 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 RCE1Q9Y256 329 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC5A6Q9Y289 635 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 A0A1B0GVI7 797 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 GNALP38405 381 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 GDNFP39905 211 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 TAS2R20P59543 309 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 GRB2P62993 217 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 PLXDC2Q6UX71 529 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 FAM57BQ71RH2 274 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 BIVMQ86UB2 503 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 COMMD2Q86X83 199 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 JAGN1Q8N5M9 183 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 GJC3Q8NFK1 279 aa15.28■□□□□ 0.04
PCDHGC3-205ENST00000617641 LOC100289279A0A1B0GTE1 492 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 LINC01387J3KSC0 135 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 ORC5O43913 435 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 NME2P1O60361 137 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 CYTIPO60759 359 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 CCNKO75909 580 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 NME2P22392 152 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 HTR2CP28335 458 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 MEOX1P50221 254 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 PLA1AQ53H76 456 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 SLC25A25Q6KCM7 469 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 UBASH3BQ8TF42 649 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 ALKBH3Q96Q83 286 aaPredicted RBP15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 MARVELD1Q9BSK0 173 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 CRLF2Q9HC73 371 aa15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 MRPL15Q9P015 296 aaKnown RBP15.27■□□□□ 0.04
PCDHGC3-205ENST00000617641 TMEM272A0A1B0GTI8 110 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 MEGF11A6BM72 1044 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 GABARAPH6UMI1 98 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 SULT1B1O43704 296 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 ITGB2P05107 769 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 CLDN18P56856 261 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 MRPS34P82930 218 aaKnown RBP15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 KLF9Q13886 244 aaPredicted RBP15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 TATDN3Q17R31 274 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 GFOD2Q3B7J2 385 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 PDSS1Q5T2R2 415 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 ABHD12BQ7Z5M8 362 aaPredicted RBP15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 NAA40Q86UY6 237 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 FBXO17Q96EF6 278 aa15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 KLF13Q9Y2Y9 288 aaPredicted RBP15.27■□□□□ 0.03
PCDHGC3-205ENST00000617641 C5orf63A6NC05 138 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 NKX2-8O15522 239 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 CTAG2O75638 210 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 GLSO94925 669 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 CD37P11049 281 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 RAB25P57735 213 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 CCDC92Q53HC0 331 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 ANKRD16Q6P6B7 361 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 GPR137CQ8N3F9 429 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 OR6M1Q8NGM8 313 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 SLC7A6Q92536 515 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 PLEKHA1Q9HB21 404 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 GPR84Q9NQS5 396 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 E9PLN8 166 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 F5H5K5 113 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 KRT33AO76009 404 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 KDM4BO94953 1096 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 MT-ND4P03905 459 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 HIST1H3AP68431 136 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 HIST2H3PS2Q5TEC6 136 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 HIST2H3AQ71DI3 136 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 FCAMRQ8WWV6 532 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 FAM71F1Q96KD3 344 aaPredicted RBP15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 KLK11Q9UBX7 282 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 ALG5Q9Y673 324 aa15.26■□□□□ 0.03
PCDHGC3-205ENST00000617641 CENPXA8MT69 81 aa15.25■□□□□ 0.03
PCDHGC3-205ENST00000617641 A8MV72 311 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms