RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-223	ENST00000617585	VNN3	Q9NY84	501 aa		18.88	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	IQCF6	A8MYZ5	107 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ACOT8	O14734	319 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	HLX	Q14774	488 aa	Predicted RBP	18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SLC27A4	Q6P1M0	643 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	CD300LD	Q6UXZ3	194 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	LINC00346	Q8IVM7	164 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TEX29	Q8N6K0	151 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	AQP11	Q8NBQ7	271 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR2AJ1	Q8NGZ0	328 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR2T4	Q8NH00	348 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SIGLEC11	Q96RL6	698 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	RBM4	Q9BWF3	364 aa	Known RBP	18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	CDADC1	Q9BWV3	514 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	DCAF16	Q9NXF7	216 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PTTG3P	Q9NZH4	202 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	BAIAP2	Q9UQB8	552 aa		18.87	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	RAP2A	P10114	183 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	GATA3	P23771	443 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TRAP1	Q12931	704 aa	Known RBP	18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PCK2	Q16822	640 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TMEM155	Q4W5P6	130 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	LIPN	Q5VXI9	398 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR2T2	Q6IF00	324 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	C1orf229	Q6ZS94	237 aa	Predicted RBP	18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SLC37A3	Q8NCC5	494 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR13G1	Q8NGZ3	307 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ITLN1	Q8WWA0	313 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ZNRF4	Q8WWF5	429 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	MAP6	Q96JE9	813 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PITX2	Q99697	317 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	GAL3ST1	Q99999	423 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SLC30A2	Q9BRI3	323 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	NMNAT2	Q9BZQ4	307 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	REEP1	Q9H902	201 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	DDX28	Q9NUL7	540 aa	Known RBP	18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	FAM53C	Q9NYF3	392 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	METRN	Q9UJH8	293 aa		18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SAMHD1	Q9Y3Z3	626 aa	Known RBP	18.86	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PPIAL4E	A0A075B759	164 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585		A0A0A6YYJ9	748 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PPIAL4C	A0A0B4J2A2	164 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PPIAL4D	F5H284	164 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585		J3QLI3	93 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	IFNL4	K9M1U5	179 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TCF21	O43680	179 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	HLA-DQA2	P01906	255 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PPIAL4F	P0DN26	164 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OTX1	P32242	354 aa	Predicted RBP	18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PPP1R8	Q12972	351 aa	Known RBP	18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	LRRC28	Q86X40	367 aa	Predicted RBP	18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	CYB561A3	Q8NBI2	242 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR10S1	Q8NGN2	331 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ZNF582	Q96NG8	517 aa	Predicted RBP	18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR2V2	Q96R30	315 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TSSK6	Q9BXA6	273 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TMPRSS13	Q9BYE2	586 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	GCM1	Q9NP62	436 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PPP1R3C	Q9UQK1	317 aa		18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	18.85	■□□□□ 0.61
ARHGEF1-223	ENST00000617585		A0A0G2JMP0	313 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585		A0A0X1KG70	313 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ARRDC5	A6NEK1	342 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	FSTL3	O95633	263 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	AVP	P01185	164 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ZNF823	P16415	610 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SELE	P16581	610 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	PYCR1	P32322	319 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	SLC25A1	P53007	311 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TEX30	Q5JUR7	227 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	FAHD2B	Q6P2I3	314 aa	Predicted RBP	18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR5AS1	Q8N127	324 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR4M2	Q8NGB6	313 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	OR4Q3	Q8NH05	313 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	FAHD2A	Q96GK7	314 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	TBC1D23	Q9NUY8	699 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585		U3KQV3	271 aa		18.84	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	ANK2	Q01484	3957 aa		18.83	■□□□□ 0.61
ARHGEF1-223	ENST00000617585	AQP12B	A6NM10	295 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585		F5H5K5	113 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MLNR	O43193	412 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	HOXB6	P17509	224 aa	Known RBP	18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	TPTE	P56180	551 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SCGB2A2	Q13296	93 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	GK2	Q14410	553 aa	Predicted RBP	18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ZNF181	Q2M3W8	571 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	NAA40	Q86UY6	237 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	AQP12A	Q8IXF9	295 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	ADGRG5	Q8IZF4	528 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	SPIC	Q8N5J4	248 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	PROKR2	Q8NFJ6	384 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	OR2T33	Q8NG76	320 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	CLPTM1L	Q96KA5	538 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	MEGF10	Q96KG7	1140 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	C19orf24	Q9BVV8	132 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	HCAR1	Q9BXC0	346 aa		18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	METTL17	Q9H7H0	456 aa	Predicted RBP	18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	PATZ1	Q9HBE1	687 aa	Known RBP	18.83	■□□□□ 0.6
ARHGEF1-223	ENST00000617585	COMMD3-BMI1	R4GMX3	469 aa		18.83	■□□□□ 0.6

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