RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 SLC6A9P48067 706 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 CX3CR1P49238 355 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 RIDAP52758 137 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 GALEQ14376 348 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 TP53I3Q53FA7 332 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 RBM48Q5RL73 367 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 VHLLQ6RSH7 139 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ARL9Q6T311 187 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 PLEKHG7Q6ZR37 379 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF101Q8IZC7 436 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 YIPF7Q8N8F6 280 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ABHD4Q8TB40 342 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 SGCDQ92629 289 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 AKAP1Q92667 903 aaKnown RBP eCLIP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 MYDGFQ969H8 173 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 C14orf79Q96F83 325 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF649Q9BS31 505 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ALG8Q9BVK2 526 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ERVK13-1Q9NX77 482 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 DIMT1Q9UNQ2 313 aaKnown RBP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ABCA4P78363 2273 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 E7EQL1 145 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 SMPD2O60906 423 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 SULT1C4O75897 302 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 RPP14O95059 124 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 APOC1P02654 83 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 LCKP06239 509 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 SLC2A1P11166 492 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 C21orf33P30042 268 aaPredicted RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 ETV1P50549 477 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 OR12D2P58182 307 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 NKX6-1P78426 367 aaPredicted RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF672Q499Z4 452 aaPredicted RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF684Q5T5D7 378 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 DRAM2Q6UX65 266 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 TMEM200AQ86VY9 491 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 NUP37Q8NFH4 326 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 IPCEF1Q8WWN9 437 aaPredicted RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 MRPL48Q96GC5 212 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 JAM3Q9BX67 310 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 CLEC4MQ9H2X3 399 aaPredicted RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 DUSP21Q9H596 190 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 NIPAL2Q9H841 368 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 BRD7Q9NPI1 651 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 TBCCD1Q9NVR7 557 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 CHCHD3Q9NX63 227 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 CISD1Q9NZ45 108 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 ERVK-18Q9QC07 812 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 CLEC2DQ9UHP7 191 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 GNG8Q9UK08 70 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 STARD10Q9Y365 291 aa13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 EXOSC1Q9Y3B2 195 aaKnown RBP13.47□□□□□ -0.25
PCDHGC3-204ENST00000617222 J3QLW9 94 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 GPRIN2O60269 458 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 CDK1P06493 297 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 LIMS3P0CW19 117 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 LIMS4P0CW20 117 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF19P17023 458 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 MYL12AP19105 171 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 SSTR2P30874 369 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 THBS4P35443 961 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 GLRXP35754 106 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 RGS6P49758 472 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF121P58317 390 aaPredicted RBP13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 ERVS71-1P61550 626 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 PPP1CBP62140 327 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 SLC35A2P78381 396 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 CDONQ4KMG0 1287 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 LIPNQ5VXI9 398 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 COLCA1Q6ZS62 124 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 RFPL4BQ6ZWI9 263 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 KCTD20Q7Z5Y7 419 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 OR1J1Q8NGS3 322 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 APOBEC3DQ96AK3 386 aaPredicted RBP13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 MYCBPQ99417 103 aaPredicted RBP13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 DOK1Q99704 481 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 C1QTNF5Q9BXJ0 243 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 BCL2L14Q9BZR8 327 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 CA10Q9NS85 328 aa13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 PAK1IP1Q9NWT1 392 aaPredicted RBP13.46□□□□□ -0.25
PCDHGC3-204ENST00000617222 HEATR1Q9H583 2144 aaKnown RBP13.46□□□□□ -0.26
PCDHGC3-204ENST00000617222 ROS1P08922 2347 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 TMEM269A0A1B0GVZ9 245 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 C5orf63A6NC05 138 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 ICMTO60725 284 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 TACSTD2P09758 323 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 ANOS1P23352 680 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 EEF1B2P24534 225 aaKnown RBP13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 DCTDP32321 178 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 PSMB10P40306 273 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 FABP6P51161 128 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 SPATA46Q5T0L3 261 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 UNQ6126/PRO20091Q6UXV3 157 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 FAM57BQ71RH2 274 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 FAM220AQ7Z4H9 259 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 SLC25A40Q8TBP6 338 aa13.45□□□□□ -0.26
PCDHGC3-204ENST00000617222 TMEM171Q8WVE6 324 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms