RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TEX30Q5JUR7 227 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 SLC18B1Q6NT16 456 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 TMEM108Q6UXF1 575 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 DCXRQ7Z4W1 244 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF786Q8N393 782 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 FBLIM1Q8WUP2 373 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 MNTQ99583 582 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 DHRS9Q9BPW9 319 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 C1orf198Q9H425 327 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 ADGRL4Q9HBW9 690 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 PLEK2Q9NYT0 353 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 CYB5R1Q9UHQ9 305 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 LHFPL6Q9Y693 200 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 ANK2Q01484 3957 aa12.84□□□□□ -0.35
UBXN1-218ENST00000616865 PHYHO14832 338 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 LYNP07948 512 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 SLC25A16P16260 332 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 APLNRP35414 380 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 HTR5AP47898 357 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 IDH3GP51553 393 aaPredicted RBP12.83□□□□□ -0.36
UBXN1-218ENST00000616865 ACTC1P68032 377 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 ACTA1P68133 377 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 RAB40BQ12829 278 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 RAB39AQ14964 217 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 PABPC1L2AQ5JQF8 200 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 MUC15Q8N387 334 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 STX19Q8N4C7 294 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF525Q8N782 197 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 OR4F15Q8NGB8 312 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 AKR7LQ8NHP1 331 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 OTOSQ8NHW6 89 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 FGFBP3Q8TAT2 258 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 LGALS12Q96DT0 336 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
UBXN1-218ENST00000616865 MYCBPQ99417 103 aaPredicted RBP12.83□□□□□ -0.36
UBXN1-218ENST00000616865 TBX5Q99593 518 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 OR2H1Q9GZK4 316 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 CENPMQ9NSP4 180 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 B3GNT2Q9NY97 397 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 POU2F3Q9UKI9 436 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 BLOC1S6Q9UL45 172 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 TPRKBQ9Y3C4 175 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 SVEP1Q4LDE5 3571 aa12.83□□□□□ -0.36
UBXN1-218ENST00000616865 DAPL1A0PJW8 107 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 H7C417 338 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 SLC1A7O00341 560 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 RER1O15258 196 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 XPNPEP2O43895 674 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 MMP7P09237 267 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-218ENST00000616865 OR2T7P0C7T2 308 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF16P17020 682 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-218ENST00000616865 PTAFRP25105 342 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 HCCSP53701 268 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 CXCR4P61073 352 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 PSG4Q00888 419 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 RAB35Q15286 201 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 KRTAP24-1Q3LI83 254 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ELFN2Q5R3F8 820 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF774Q6NX45 483 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-218ENST00000616865 SLC22A25Q6T423 547 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 SPATC1Q76KD6 591 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.82□□□□□ -0.36
UBXN1-218ENST00000616865 FBXL14Q8N1E6 418 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF540Q8NDQ6 660 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 OR1J2Q8NGS2 313 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 OR2T27Q8NH04 317 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ASB17Q8WXJ9 295 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 SLAMF6Q96DU3 332 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ABHD6Q9BV23 337 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 BEX2Q9BXY8 128 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 HDHD2Q9H0R4 259 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 WNT5BQ9H1J7 359 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 PLCXD1Q9NUJ7 323 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF224Q9NZL3 707 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 LPAR3Q9UBY5 353 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 LRRC42Q9Y546 428 aa12.82□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF503-AS2A6NEH8 195 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 ZNF878C9JN71 531 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 SERPINA5P05154 406 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 H2BFMP0C1H6 154 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 MYL12AP19105 171 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 EEF1B2P24534 225 aaKnown RBP12.81□□□□□ -0.36
UBXN1-218ENST00000616865 CD40P25942 277 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 GDI2P50395 445 aaKnown RBP12.81□□□□□ -0.36
UBXN1-218ENST00000616865 ECH1Q13011 328 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 PCK2Q16822 640 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 TBC1D28Q2M2D7 210 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 AHSA2Q719I0 299 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 KRT77Q7Z794 578 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 ACBD7Q8N6N7 88 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 FAM169BQ8N8A8 192 aa12.81□□□□□ -0.36
UBXN1-218ENST00000616865 OR52I1Q8NGK6 324 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms