RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 SPI1P17947 270 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 PRKACGP22612 351 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 BLVRAP53004 296 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 TNFAIP6P98066 277 aaPredicted RBP18.83■□□□□ 0.6
CBWD3-212ENST00000616550 CDK5R2Q13319 367 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 KRTAP27-1Q3LI81 207 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 SLC27A4Q6P1M0 643 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 FBXW12Q6X9E4 464 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 HS3ST5Q8IZT8 346 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 IQCF1Q8N6M8 205 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 LINC01356Q8N9X3 169 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 ATG16L2Q8NAA4 619 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 ZNF511Q8NB15 262 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 OR6K6Q8NGW6 343 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 CLDND2Q8NHS1 167 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 OTULINQ96BN8 352 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 MAP6Q96JE9 813 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 BEX2Q9BXY8 128 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 SHARPINQ9H0F6 387 aa18.83■□□□□ 0.6
CBWD3-212ENST00000616550 CLDN25C9JDP6 229 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 ZNF593O00488 134 aaPredicted RBP18.82■□□□□ 0.6
CBWD3-212ENST00000616550 DEAF1O75398 565 aaPredicted RBP18.82■□□□□ 0.6
CBWD3-212ENST00000616550 CD55P08174 381 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 ACSM4P0C7M7 580 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 CLUP10909 449 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 OSMP13725 252 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 PAICSP22234 425 aaKnown RBP18.82■□□□□ 0.6
CBWD3-212ENST00000616550 RPS27P42677 84 aaKnown RBP18.82■□□□□ 0.6
CBWD3-212ENST00000616550 ENTPD1P49961 510 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 TPTEP56180 551 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 GINS1Q14691 196 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 LYPD4Q6UWN0 246 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 OR2Z1Q8NG97 314 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 CCL17Q92583 94 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 SPTSSAQ969W0 71 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 TIMD4Q96H15 378 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 C1QTNF5Q9BXJ0 243 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 WDR76Q9H967 626 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 LPAR3Q9UBY5 353 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 CACNG2Q9Y698 323 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 COMMD3-BMI1R4GMX3 469 aa18.82■□□□□ 0.6
CBWD3-212ENST00000616550 JMJD1CQ15652 2540 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 TIPRLO75663 272 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 LCATP04180 440 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 SPARCP09486 303 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 CDH15P55291 814 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 MVKQ03426 396 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 SLC3A1Q07837 685 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 AVPI1Q5T686 147 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 COLCA1Q6ZS62 124 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 DCXRQ7Z4W1 244 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 OR5AS1Q8N127 324 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 RAB1CQ92928 201 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 NRBF2Q96F24 287 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 C1orf159Q96HA4 380 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 HCAR1Q9BXC0 346 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 TEX12Q9BXU0 123 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 TREM2Q9NZC2 230 aa18.81■□□□□ 0.6
CBWD3-212ENST00000616550 FAM183AA6NL82 134 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 WNT9BO14905 357 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 HMGN1P05114 100 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 TNFRSF1AP19438 455 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 IGFBP5P24593 272 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 MALLQ13021 153 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 TAF13Q15543 124 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 TEX30Q5JUR7 227 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 C1orf146Q5VVC0 180 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 OR2T2Q6IF00 324 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 ACSM5Q6NUN0 579 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 SHQ1Q6PI26 577 aaKnown RBP18.8■□□□□ 0.6
CBWD3-212ENST00000616550 Q6ZR03 302 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 NAA40Q86UY6 237 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 ZNF582Q96NG8 517 aaPredicted RBP18.8■□□□□ 0.6
CBWD3-212ENST00000616550 MED20Q9H944 212 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 NTN4Q9HB63 628 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 KIF17Q9P2E2 1029 aa18.8■□□□□ 0.6
CBWD3-212ENST00000616550 DYSFO75923 2080 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 B4DSR2 109 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 M0R135 149 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 SURF4O15260 269 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 IFNA2P01563 188 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 SELEP16581 610 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 SLC6A9P48067 706 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 PCK2Q16822 640 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 PEG10Q86TG7 708 aaKnown RBP18.79■□□□□ 0.6
CBWD3-212ENST00000616550 OR8G5Q8NG78 346 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 OR10S1Q8NGN2 331 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 OR13G1Q8NGZ3 307 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 DNAJC9Q8WXX5 260 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 ZNF799Q96GE5 643 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 COPS4Q9BT78 406 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 CENPMQ9NSP4 180 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 DDX28Q9NUL7 540 aaKnown RBP18.79■□□□□ 0.6
CBWD3-212ENST00000616550 IL19Q9UHD0 177 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 WIPI2Q9Y4P8 454 aa18.79■□□□□ 0.6
CBWD3-212ENST00000616550 PRR23D1E9PI22 279 aaPredicted RBP18.78■□□□□ 0.6
CBWD3-212ENST00000616550 PRR23D2P0DMB1 279 aaPredicted RBP18.78■□□□□ 0.6
CBWD3-212ENST00000616550 PSKH1P11801 424 aa18.78■□□□□ 0.6
CBWD3-212ENST00000616550 HNF1AP20823 631 aa18.78■□□□□ 0.6
CBWD3-212ENST00000616550 GSTT1P30711 240 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms