RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FAM183AA6NL82 134 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 RAB40ALP0C0E4 278 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 IAPPP10997 89 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 RGNQ15493 299 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 WIPI1Q5MNZ9 446 aaPredicted RBP11.54□□□□□ -0.56
TCF4-248ENST00000616053 GDPGP1Q6ZNW5 385 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 ZNF596Q8TC21 504 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 RAB40AQ8WXH6 277 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 SEH1LQ96EE3 360 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 THAP7Q9BT49 309 aaPredicted RBP11.54□□□□□ -0.56
TCF4-248ENST00000616053 KCNG2Q9UJ96 466 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 COQ4Q9Y3A0 265 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
TCF4-248ENST00000616053 LYRM1O43325 122 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 CXCL13O43927 109 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 TMIGD3P0DMS9 266 aaPredicted RBP11.54□□□□□ -0.56
TCF4-248ENST00000616053 GLIPR1L1Q6UWM5 242 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 TMUB2Q71RG4 321 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 PRSS3P2Q8NHM4 247 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 ASB5Q8WWX0 329 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 LYSMD1Q96S90 227 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 HS3ST3A1Q9Y663 406 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 A0A087WZY1 265 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 SDCBPO00560 298 aaPredicted RBP11.54□□□□□ -0.56
TCF4-248ENST00000616053 SS18L1O75177 396 aaPredicted RBP11.54□□□□□ -0.56
TCF4-248ENST00000616053 UBL3O95164 117 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 MT-CO3P00414 261 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 SRFP11831 508 aa11.54□□□□□ -0.56
TCF4-248ENST00000616053 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
TCF4-248ENST00000616053 CBY3A6NI87 242 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 NRASP01111 189 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 QDPRP09417 244 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 SLC25A4P12235 298 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 EIF3IQ13347 325 aaKnown RBP11.53□□□□□ -0.56
TCF4-248ENST00000616053 KHDC1Q4VXA5 237 aaKnown RBP11.53□□□□□ -0.56
TCF4-248ENST00000616053 CALHM3Q86XJ0 350 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 LYSMD2Q8IV50 215 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 LYG1Q8N1E2 194 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 TMEM163Q8TC26 289 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 NPY6RQ99463 290 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 MAGIXQ9H6Y5 334 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 CXorf49A8MYA2 514 aaPredicted RBP11.53□□□□□ -0.56
TCF4-248ENST00000616053 SSSCA1O60232 199 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 FABP9Q0Z7S8 132 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 PRSS8Q16651 343 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 LAMTOR1Q6IAA8 161 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 SLC39A11Q8N1S5 342 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ISL2Q96A47 359 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ELP4Q96EB1 424 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ELOVL1Q9BW60 279 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 UNC13BO14795 1591 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 GLI2P10070 1586 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 DUSP1P28562 367 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 DLX5P56178 289 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 RAB22AQ9UL26 194 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ZBTB25P24278 435 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 TPMTP51580 245 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 OR10R2Q8NGX6 335 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ERGIC1Q969X5 290 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 MRGPRX2Q96LB1 330 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 MUS81Q96NY9 551 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 INPP5EQ9NRR6 644 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 NUP214P35658 2090 aaPredicted RBP11.53□□□□□ -0.56
TCF4-248ENST00000616053 CACNA1CQ13936 2221 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 NRN1LQ496H8 165 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 CYSLTR2Q9NS75 346 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ARNTP27540 789 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 HAAOP46952 286 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 PMP22Q01453 160 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ENDOGQ14249 297 aaKnown RBP11.53□□□□□ -0.56
TCF4-248ENST00000616053 SLC5A12Q1EHB4 618 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 C1orf140Q5VVS0 124 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 EPGNQ6UW88 154 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 TBC1D26Q86UD7 250 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ADAMTS14Q8WXS8 1223 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 EMC6Q9BV81 110 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 OR1A1Q9P1Q5 309 aa11.53□□□□□ -0.56
TCF4-248ENST00000616053 ELK1P19419 428 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 PCSK6P29122 969 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 SORDQ00796 357 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 C18orf21Q32NC0 220 aaPredicted RBP11.52□□□□□ -0.56
TCF4-248ENST00000616053 MDGA2Q7Z553 956 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 ANKRD13BQ86YJ7 626 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 SVBPQ8N300 66 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 FBXO27Q8NI29 283 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 TRIM77I1YAP6 450 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 HRASP01112 189 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 FAM87AP0C7U9 286 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 MYOGP15173 224 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 NMNAT3Q96T66 252 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 CSF3RQ99062 836 aa11.52□□□□□ -0.56
TCF4-248ENST00000616053 KIAA0100Q14667 2235 aaKnown RBP11.52□□□□□ -0.56
TCF4-248ENST00000616053 TCRBV7S3A2A0A539 114 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 FAM159BA6NKW6 160 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 ADAM10O14672 748 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 RHBDL1O75783 438 aa11.52□□□□□ -0.57
TCF4-248ENST00000616053 M6PRP20645 277 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms