RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 RNF113BQ8IZP6 322 aaKnown RBP11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 RSRC1Q96IZ7 334 aaKnown RBP11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 TSSK2Q96PF2 358 aa11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 CDADC1Q9BWV3 514 aa11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 HCAR1Q9BXC0 346 aa11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 NUAK2Q9H093 628 aa11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 CMTM6Q9NX76 183 aa11.16□□□□□ -0.62
HMGB1P24-201ENST00000611897 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 CLDN34H7C241 214 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 PLATP00750 562 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 NCK1P16333 377 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 SLC7A2P52569 658 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 RAG2P55895 527 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 LSM6P62312 80 aaKnown RBP11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 HOXA4Q00056 320 aaPredicted RBP11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 PAX2Q02962 417 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 PRAMEF6Q5VXH4 476 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 GPR139Q6DWJ6 353 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 C16orf87Q6PH81 154 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 FIP1L1Q6UN15 594 aaKnown RBP11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 TMPRSS11FQ6ZWK6 438 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 LINC00346Q8IVM7 164 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 KIR3DL3Q8N743 410 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 HDHD2Q9H0R4 259 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 NMNAT1Q9HAN9 279 aaPredicted RBP11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 TMEM100Q9NV29 134 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 MRGBPQ9NV56 204 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 AURKCQ9UQB9 309 aa11.15□□□□□ -0.62
HMGB1P24-201ENST00000611897 F5H5K5 113 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 AHCYL1O43865 530 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 PPP1R3DO95685 299 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 DNM1P34Q6PK57 102 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 HDXQ7Z353 690 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 ARPINQ7Z6K5 226 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 ADCK1Q86TW2 530 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 FITM2Q8N6M3 262 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 GJC3Q8NFK1 279 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 OR11L1Q8NGX0 322 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 CCT8L2Q96SF2 557 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 PITX2Q99697 317 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 COQ7Q99807 217 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 SLC30A2Q9BRI3 323 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 VSX1Q9NZR4 365 aaPredicted RBP11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 KIF17Q9P2E2 1029 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 TMCC3Q9ULS5 477 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 SIGLEC7Q9Y286 467 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 LHFPL6Q9Y693 200 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 ENPP4Q9Y6X5 453 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 V9GYQ6 96 aa11.14□□□□□ -0.63
HMGB1P24-201ENST00000611897 VWFP04275 2813 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 C22orf46C9J442 243 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 J3QW42 95 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 DCTN6O00399 190 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 NME4O00746 187 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 ENSAO43768 121 aaKnown RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 FAM20BO75063 409 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 DIRAS1O95057 198 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 HLA-DQA2P01906 255 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 LCATP04180 440 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 SFTPBP07988 381 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 PMELP40967 661 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 CDKN2AP42771 156 aaKnown RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 WDR25Q64LD2 544 aaPredicted RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 CFAP77Q6ZQR2 320 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 DCDC5Q6ZRR9 648 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 CBLL1Q75N03 491 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 MRPL21Q7Z2W9 205 aaKnown RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 SLC15A3Q8IY34 581 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 LNX2Q8N448 690 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 FAM156AQ8NDB6 213 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 OR52J3Q8NH60 311 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 FANK1Q8TC84 345 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 SPRYD4Q8WW59 207 aaPredicted RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 WFDC12Q8WWY7 111 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 ERMAPQ96PL5 475 aaPredicted RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 CHIAQ9BZP6 476 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 SLITRK2Q9H156 845 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 FN3KQ9H479 309 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 BEX1Q9HBH7 125 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 SRA1Q9HD15 236 aaKnown RBP11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 NRIP3Q9NQ35 241 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 ATPIF1Q9UII2 106 aa11.13□□□□□ -0.63
HMGB1P24-201ENST00000611897 TRBV4-1A0A0J9YWV2 114 aa11.12□□□□□ -0.63
HMGB1P24-201ENST00000611897 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
HMGB1P24-201ENST00000611897 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
HMGB1P24-201ENST00000611897 SRRM5B3KS81 715 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms