RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 PCK2Q16822 640 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 TEX30Q5JUR7 227 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 OR51L1Q8NGJ5 315 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 OR9Q1Q8NGQ5 310 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 TEX47Q8TBZ9 253 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 CCL17Q92583 94 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 SLCO4A1Q96BD0 722 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 CACNG2Q9Y698 323 aa16.37■□□□□ 0.21
TCF3-219ENST00000610756 TVP23AA6NH52 213 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 RIIAD1A6NNX1 92 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 B4DSR2 109 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 CLDN25C9JDP6 229 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 F5H5K5 113 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 H3BN98 237 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 FKBP6O75344 327 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 IFNA2P01563 188 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 SPI1P17947 270 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 TNFAIP6P98066 277 aaPredicted RBP16.36■□□□□ 0.21
TCF3-219ENST00000610756 CCNIQ14094 377 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 HLXQ14774 488 aaPredicted RBP16.36■□□□□ 0.21
TCF3-219ENST00000610756 FAM120AOSQ5T036 256 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 Q6ZR03 302 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 RAB1CQ92928 201 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 MMADHCQ9H3L0 296 aaPredicted RBP16.36■□□□□ 0.21
TCF3-219ENST00000610756 WDR76Q9H967 626 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 ZNF556Q9HAH1 456 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 CUBNO60494 3623 aa16.36■□□□□ 0.21
TCF3-219ENST00000610756 E2F6O75461 281 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 ANXA8P13928 327 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 ZNF3P17036 446 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 TNFSF4P23510 183 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 GRK5P34947 590 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 TPTEP56180 551 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 SLC3A1Q07837 685 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 SLC27A4Q6P1M0 643 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 NAA40Q86UY6 237 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 ZNF511Q8NB15 262 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 OR10S1Q8NGN2 331 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 NRBF2Q96F24 287 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 TIMD4Q96H15 378 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 DDX28Q9NUL7 540 aaKnown RBP16.35■□□□□ 0.21
TCF3-219ENST00000610756 TREM2Q9NZC2 230 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 PTTG3PQ9NZH4 202 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 IL19Q9UHD0 177 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 WIPI2Q9Y4P8 454 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 COMMD3-BMI1R4GMX3 469 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 MALRD1Q5VYJ5 2156 aa16.35■□□□□ 0.21
TCF3-219ENST00000610756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.34■□□□□ 0.215e-9■■■□□ 16.2
TCF3-219ENST00000610756 ZNF593O00488 134 aaPredicted RBP16.34■□□□□ 0.21
TCF3-219ENST00000610756 SURF4O15260 269 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 GYPBP06028 91 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 CLUP10909 449 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 OSMP13725 252 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 TNFRSF1AP19438 455 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 PRKACGP22612 351 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 OTX1P32242 354 aaPredicted RBP16.34■□□□□ 0.21
TCF3-219ENST00000610756 RPS27P42677 84 aaKnown RBP16.34■□□□□ 0.21
TCF3-219ENST00000610756 ENTPD1P49961 510 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 ERFP50548 548 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 DVL1P1P54792 670 aaPredicted RBP16.34■□□□□ 0.21
TCF3-219ENST00000610756 MVKQ03426 396 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 SPRNQ5BIV9 151 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 LINC01590Q5TEZ4 76 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 OR2T2Q6IF00 324 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 ACSM5Q6NUN0 579 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 LYPD4Q6UWN0 246 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 OR8G5Q8NG78 346 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 OR2Z1Q8NG97 314 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 SPTSSAQ969W0 71 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 ZNF582Q96NG8 517 aaPredicted RBP16.34■□□□□ 0.21
TCF3-219ENST00000610756 NARFLQ9H6Q4 476 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 NTN4Q9HB63 628 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 ATRQ13535 2644 aa16.34■□□□□ 0.21
TCF3-219ENST00000610756 LCATP04180 440 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 ANPEPP15144 967 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 SELEP16581 610 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 CDK5Q00535 292 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 MALLQ13021 153 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 GINS1Q14691 196 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 CR1LQ2VPA4 569 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 AVPI1Q5T686 147 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 DCXRQ7Z4W1 244 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 HS3ST5Q8IZT8 346 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 IQCF1Q8N6M8 205 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 OR13G1Q8NGZ3 307 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 HCAR1Q9BXC0 346 aa16.33■□□□□ 0.2
TCF3-219ENST00000610756 TMEFF2Q9UIK5 374 aaPredicted RBP16.33■□□□□ 0.2
TCF3-219ENST00000610756 FBN1P35555 2871 aaKnown RBP16.32■□□□□ 0.2
TCF3-219ENST00000610756 A0A1B0GWJ7 208 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 IQCF6A8MYZ5 107 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 FAM157AC9JC47 383 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 M0R135 149 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 DEAF1O75398 565 aaPredicted RBP16.32■□□□□ 0.2
TCF3-219ENST00000610756 HMGN1P05114 100 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 PSKH1P11801 424 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 HNF1AP20823 631 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 POU1F1P28069 291 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 THBS2P35442 1172 aa16.32■□□□□ 0.2
TCF3-219ENST00000610756 GK2Q14410 553 aaPredicted RBP16.32■□□□□ 0.2
TCF3-219ENST00000610756 SHQ1Q6PI26 577 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms