RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 BTNL3Q6UXE8 466 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 LRRN1Q6UXK5 716 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 DPY19L2P2Q6ZN68 376 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 ADCK1Q86TW2 530 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 MOGAT3Q86VF5 341 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 TAF15Q92804 592 aaKnown RBP eCLIP11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC25A28Q96A46 364 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 GPX7Q96SL4 187 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 COQ7Q99807 217 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC30A2Q9BRI3 323 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 WDR76Q9H967 626 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 UNKLQ9H9P5 680 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 EFCAB1Q9HAE3 211 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 TMEM100Q9NV29 134 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 NDUFAF4Q9P032 175 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 RPS6KA6Q9UK32 745 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 B9D1Q9UPM9 204 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 LHFPL6Q9Y693 200 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 MEGF8Q7Z7M0 2845 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 IGHV2-70DA0A0C4DH43 119 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 TRBV4-1A0A0J9YWV2 114 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 DIRAS1O95057 198 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 HLA-DPB1P04440 258 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 SELEP16581 610 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 RHCEP18577 417 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 FPR3P25089 353 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 CRABP1P29762 137 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 MTNR1AP48039 350 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 DBPQ10586 325 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 SEC23BQ15437 767 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 ZNF181Q2M3W8 571 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 GLYATQ6IB77 296 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 OR52J3Q8NH60 311 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 UPRTQ96BW1 309 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 NEIL1Q96FI4 390 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 PLEKHA8Q96JA3 519 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 C7orf34Q96L11 122 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 ERMAPQ96PL5 475 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 KCTD14Q9BQ13 255 aaPredicted RBP11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
POLR2J3-219ENST00000608621 IGLV1-36A0A0B4J1U3 117 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 KIR2DS1A0A191URI9 304 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 LRRC30A6NM36 301 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 POM121CA8CG34 1229 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 CLDN34H7C241 214 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 PPP1R3DO95685 299 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 PLATP00750 562 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 PRSS12P56730 875 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 IL13RA1P78552 427 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 COX10Q12887 443 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 ZNF404Q494X3 552 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 LEG1Q6P5S2 330 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 PGM2L1Q6PCE3 622 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 DNM1P34Q6PK57 102 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 COLCA1Q6ZS62 124 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 C9orf139Q6ZV77 190 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 NAA40Q86UY6 237 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 C1orf87Q8N0U7 546 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 OR6V1Q8N148 313 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 OR8B3Q8NGG8 313 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 DACT3Q96B18 629 aaPredicted RBP11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 OR8B2Q96RD0 313 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 NUDT16L1Q9BRJ7 211 aaKnown RBP11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 HCAR1Q9BXC0 346 aa11.18□□□□□ -0.62
POLR2J3-219ENST00000608621 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 A0A1B0GWJ7 208 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 F5H5K5 113 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 NDUFAB1O14561 156 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 CCDC22O60826 627 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 FSTL3O95633 263 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 ACSM4P0C7M7 580 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 MDH1P40925 334 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 PITPNBP48739 271 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 NUDT2P50583 147 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 PSME3P61289 254 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 GK2Q14410 553 aaPredicted RBP11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 KRT72Q14CN4 511 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 RFX4Q33E94 735 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 C16orf87Q6PH81 154 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 HACD2Q6Y1H2 254 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 FAM86B1Q8N7N1 296 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 OR4K13Q8NH42 304 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 SLCO4A1Q96BD0 722 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 NMNAT3Q96T66 252 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 PITX2Q99697 317 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 FUZQ9BT04 418 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 CDADC1Q9BWV3 514 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 DCAF13Q9NV06 445 aaKnown RBP11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
POLR2J3-219ENST00000608621 MDFIC2A0A1B0GVS7 189 aa11.16□□□□□ -0.62
POLR2J3-219ENST00000608621 RENP00797 406 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms