RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CX3CR1P49238 355 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 CHN2P52757 468 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 OR12D2P58182 307 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 GABARAPL2P60520 117 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 PSMA6P60900 246 aaKnown RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 ACTA2P62736 377 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 GRB2P62993 217 aaKnown RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 ACTG2P63267 376 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 EGR3Q06889 387 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 MFGE8Q08431 387 aaPredicted RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 ECH1Q13011 328 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 KRTAP27-1Q3LI81 207 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 CDONQ4KMG0 1287 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 BEX5Q5H9J7 111 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 OR2G6Q5TZ20 316 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 RFPL4BQ6ZWI9 263 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 ZNF679Q8IYX0 411 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ZNF101Q8IZC7 436 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ZNF283Q8N7M2 679 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 YIPF7Q8N8F6 280 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 KBTBD8Q8NFY9 601 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 IPCEF1Q8WWN9 437 aaPredicted RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 NEUROG1Q92886 237 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 MYDGFQ969H8 173 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 SPTSSAQ969W0 71 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ZNF799Q96GE5 643 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 RADILQ96JH8 1075 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 C4orf36Q96KX1 117 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 DOK1Q99704 481 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 KCNJ15Q99712 375 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 KCNS3Q9BQ31 491 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 MROQ9BYG7 248 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 CCDC90BQ9GZT6 254 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ELOVL3Q9HB03 270 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 BRD7Q9NPI1 651 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 INPP5EQ9NRR6 644 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 KCNN3Q9UGI6 736 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 BLOC1S6Q9UL45 172 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 EXOSC1Q9Y3B2 195 aaKnown RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 GRIP1Q9Y3R0 1128 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 RNF115Q9Y4L5 304 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 N6AMT1Q9Y5N5 214 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 NBPF19A0A087WUL8 3843 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 A0A1W2PPR1 153 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SHISA9B4DS77 424 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 E9PI62 339 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 MYL12BO14950 172 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 GPRIN2O60269 458 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SMPD2O60906 423 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 ZNF254O75437 659 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SRSF10O75494 262 aaKnown RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 RPP14O95059 124 aaKnown RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 PNPP00491 289 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 LALBAP00709 142 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 NGFP01138 241 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 ANXA2P07355 339 aaKnown RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 CD3EP07766 207 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 PAX7P23759 505 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 PSMB10P40306 273 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 MAP2K4P45985 399 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 RIDAP52758 137 aaKnown RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 NR1H2P55055 460 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 TPTEP56180 551 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 ZNF121P58317 390 aaPredicted RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 ERVS71-1P61550 626 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SNTB2Q13425 540 aaKnown RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 ITPR2Q14571 2701 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 DAZAP2Q15038 168 aaPredicted RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 SNAI3Q3KNW1 292 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 KCTD21Q4G0X4 260 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SPATA46Q5T0L3 261 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 LIPNQ5VXI9 398 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 XAF1Q6GPH4 301 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 DEGS2Q6QHC5 323 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SLC22A25Q6T423 547 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 DRAM2Q6UX65 266 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 FAM57BQ71RH2 274 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 RHOUQ7L0Q8 258 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 PRSS45Q7RTY3 260 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 FAM220AQ7Z4H9 259 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 RAI1Q7Z5J4 1906 aaPredicted RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 KLHL36Q8N4N3 616 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 OR1J2Q8NGS2 313 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 ABHD4Q8TB40 342 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 RNF166Q96A37 237 aaPredicted RBP6.63□□□□□ -1.35
MSH6-211ENST00000606499 PELI1Q96FA3 418 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 C4orf45Q96LM5 186 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 TMEM204Q9BSN7 226 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 CDCA4Q9BXL8 241 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 POFUT1Q9H488 388 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 SLC24A3Q9HC58 644 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 FAM206AQ9NX38 181 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 GTF2A1LQ9UNN4 478 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 STARD10Q9Y365 291 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 PDZD2O15018 2839 aa6.63□□□□□ -1.35
MSH6-211ENST00000606499 TMEM269A0A1B0GVZ9 245 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 TMEM129A0AVI4 362 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 LOC110117498-PIK3R3F6TDL0 507 aa6.62□□□□□ -1.35
MSH6-211ENST00000606499 TBX1O43435 398 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms