RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 APOC1P02654 83 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 LYNP07948 512 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 SBK2P0C263 348 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 OPRL1P41146 370 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 NAA10P41227 235 aaPredicted RBP11.92□□□□□ -0.5
RNF40-212ENST00000602784 IL18R1Q13478 541 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 TAF13Q15543 124 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 MOGQ16653 247 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 DEGS2Q6QHC5 323 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 DRAM2Q6UX65 266 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 RFPL4BQ6ZWI9 263 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 OR5L1Q8NGL2 311 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 SYNPRQ8TBG9 265 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 KLF14Q8TD94 323 aaPredicted RBP11.92□□□□□ -0.5
RNF40-212ENST00000602784 THEM6Q8WUY1 208 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 NRG4Q8WWG1 115 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 TRMT61AQ96FX7 289 aaKnown RBP11.92□□□□□ -0.5
RNF40-212ENST00000602784 COPS4Q9BT78 406 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 MRPL37Q9BZE1 423 aaKnown RBP11.92□□□□□ -0.5
RNF40-212ENST00000602784 CXXC4Q9H2H0 198 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 VCX3BQ9H321 246 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 OR51B6Q9H340 312 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 CENPMQ9NSP4 180 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 LAMP5Q9UJQ1 280 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 STARD10Q9Y365 291 aa11.92□□□□□ -0.5
RNF40-212ENST00000602784 USF3Q68DE3 2245 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 MAP1AP78559 2803 aaPredicted RBP11.91□□□□□ -0.5
RNF40-212ENST00000602784 M0R135 149 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 GCH1P30793 250 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 MTNR1AP48039 350 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 PPOXP50336 477 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 KLF3P57682 345 aaPredicted RBP11.91□□□□□ -0.5
RNF40-212ENST00000602784 ERVS71-1P61550 626 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 ROM1Q03395 351 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 ZNF691Q5VV52 312 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 KCTD18Q6PI47 426 aaPredicted RBP11.91□□□□□ -0.5
RNF40-212ENST00000602784 SETD9Q8NE22 299 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 CYGBQ8WWM9 190 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 ZNF799Q96GE5 643 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 AMELYQ99218 206 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 ADI1Q9BV57 179 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 CACNG6Q9BXT2 260 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 OR2J1Q9GZK6 312 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 NIPAL2Q9H841 368 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 SP140LQ9H930 580 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 SLCO1C1Q9NYB5 712 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 DUSP13Q9UII6 198 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 GPR160Q9UJ42 338 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 HSPE1-MOB4S4R3N1 261 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 ARFGEF3Q5TH69 2177 aa11.91□□□□□ -0.5
RNF40-212ENST00000602784 CSMD1Q96PZ7 3565 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 OTOGQ6ZRI0 2925 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 PHYHO14832 338 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 ZNF254O75437 659 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 ATP6V1G2O95670 118 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 MRPL3P09001 348 aaKnown RBP11.9□□□□□ -0.5
RNF40-212ENST00000602784 H2BFMP0C1H6 154 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 OR2T7P0C7T2 308 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 RAC2P15153 192 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 DCTDP32321 178 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 CAPGP40121 348 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 PTH2RP49190 550 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 HCCSP53701 268 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 PRSS57Q6UWY2 283 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 FBXW12Q6X9E4 464 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 LRP11Q86VZ4 500 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.9□□□□□ -0.5
RNF40-212ENST00000602784 SLC35F2Q8IXU6 374 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 OR51G2Q8NGK0 314 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 OR2T27Q8NH04 317 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 SYT3Q9BQG1 590 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 MS4A5Q9H3V2 200 aa11.9□□□□□ -0.5
RNF40-212ENST00000602784 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
RNF40-212ENST00000602784 M0R233 179 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 CLPTM1O96005 669 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 LCATP04180 440 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 HSD11B1P28845 292 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 ATP6V1E1P36543 226 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 LIPAP38571 399 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 CDKN1AP38936 164 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 PRKXP51817 358 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 ART1P52961 327 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 ATP5J2P56134 94 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 ISL1P61371 349 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 EGR3Q06889 387 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 MAD2L1BPQ15013 274 aaPredicted RBP11.89□□□□□ -0.51
RNF40-212ENST00000602784 TESK1Q15569 626 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 SPATA46Q5T0L3 261 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 NAA40Q86UY6 237 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 ZNF679Q8IYX0 411 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 TFAP2CQ92754 450 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 HAVCR1Q96D42 359 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 MROQ9BYG7 248 aa11.89□□□□□ -0.51
RNF40-212ENST00000602784 BARX1Q9HBU1 254 aaPredicted RBP11.89□□□□□ -0.51
RNF40-212ENST00000602784 MRPS18AQ9NVS2 196 aaKnown RBP11.89□□□□□ -0.51
RNF40-212ENST00000602784 CGGBP1Q9UFW8 167 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms