RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SPICQ8N5J4 248 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 ZNF283Q8N7M2 679 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 ZDHHC22Q8N966 263 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 COQ7Q99807 217 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 BTBD10Q9BSF8 475 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 EGLN3Q9H6Z9 239 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 PATZ1Q9HBE1 687 aaKnown RBP17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 ESM1Q9NQ30 184 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 MMP26Q9NRE1 261 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 PTTG3PQ9NZH4 202 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 IL19Q9UHD0 177 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 PPP1R3CQ9UQK1 317 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 CDH10Q9Y6N8 788 aa17.86■□□□□ 0.45
PPFIA3-209ENST00000602783 TCRBV5S2A0A599 114 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 OR6C68A6NDL8 312 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 J3QW42 95 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 TNFRSF11BO00300 401 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 KRT36O76013 467 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 MAGEA2P43356 314 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 RGS6P49758 472 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 SLC35F1Q5T1Q4 408 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 ZBTB46Q86UZ6 589 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 LRRC28Q86X40 367 aaPredicted RBP17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 LINC00346Q8IVM7 164 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 OR52L1Q8NGH7 329 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 NSL1Q96IY1 281 aa17.85■□□□□ 0.45
PPFIA3-209ENST00000602783 TRAPPC2LH3BP13 241 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 SURF4O15260 269 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 IDH3BO43837 385 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 SEC61A1P61619 476 aaKnown RBP17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 BTG1P62324 171 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 HLXQ14774 488 aaPredicted RBP17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 ZMYND11Q15326 602 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 TMEM155Q4W5P6 130 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 SLC18B1Q6NT16 456 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 CFAP77Q6ZQR2 320 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 OR5AS1Q8N127 324 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 ATG16L2Q8NAA4 619 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 DEFB108BQ8NET1 73 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 OR52E2Q8NGJ4 325 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 OR4C15Q8NGM1 316 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 DVL3Q92997 716 aaPredicted RBP17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 APOBEC3DQ96AK3 386 aaPredicted RBP17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 OR2V2Q96R30 315 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 MUC13Q9H3R2 512 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 NTN4Q9HB63 628 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 PPIAL4AQ9Y536 164 aa17.84■□□□□ 0.45
PPFIA3-209ENST00000602783 HLA-DQA2P01906 255 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 RAC2P15153 192 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 SLC6A9P48067 706 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 HMGA2P52926 109 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 SLC36A3Q495N2 470 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 LCN8Q6JVE9 175 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 RPL13AP3Q6NVV1 102 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 FBXW12Q6X9E4 464 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 ARHGAP24Q8N264 748 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 LINC00471Q8N535 108 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 OR5L1Q8NGL2 311 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 POP5Q969H6 163 aaKnown RBP17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 SIGLEC11Q96RL6 698 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 TRIM15Q9C019 465 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 MAGIXQ9H6Y5 334 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 DDX28Q9NUL7 540 aaKnown RBP17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 POLR3KQ9Y2Y1 108 aaPredicted RBP17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 AUP1Q9Y679 476 aa17.83■□□□□ 0.44
PPFIA3-209ENST00000602783 BHLHE40O14503 412 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 CCNB2O95067 398 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 FAM107AO95990 144 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 CALB2P22676 271 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 UBA52P62987 128 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 PPP1R8Q12972 351 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 ZNF154Q13106 437 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 ARMCX4Q5H9R4 360 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 OR2T2Q6IF00 324 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 ZNF770Q6IQ21 691 aaPredicted RBP17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 RBMS3Q6XE24 437 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 DHFR2Q86XF0 187 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 CCDC197Q8NCU1 140 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 OR8D4Q8NGM9 314 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 ZMYND19Q96E35 227 aaPredicted RBP17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 PITX2Q99697 317 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 GCM1Q9NP62 436 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 MRPL22Q9NWU5 206 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 VNN3Q9NY84 501 aa17.82■□□□□ 0.44
PPFIA3-209ENST00000602783 TMEM178BH3BS89 294 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 SPRY1O43609 319 aaPredicted RBP17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 ZNF12P17014 697 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 PYCR1P32322 319 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 GGT2P36268 569 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 MDH2P40926 338 aaKnown RBP17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 KRTAP27-1Q3LI81 207 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 SIGLECL1Q8N7X8 197 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 CYB561A3Q8NBI2 242 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 AQP11Q8NBQ7 271 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 OR10AD1Q8NGE0 317 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 OR2AJ1Q8NGZ0 328 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 ATF6BQ99941 703 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 CDADC1Q9BWV3 514 aa17.81■□□□□ 0.44
PPFIA3-209ENST00000602783 WDR76Q9H967 626 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms