RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	COMMD3-BMI1	R4GMX3	469 aa		13.14	□□□□□ -0.31
PLD3-223	ENST00000600948	GYPB	P06028	91 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	ACSM4	P0C7M7	580 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	CLU	P10909	449 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF823	P16415	610 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	SPI1	P17947	270 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	LMO4	P61968	165 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	HLX	Q14774	488 aa	Predicted RBP	13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	HFE	Q30201	348 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	AVPI1	Q5T686	147 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	HS3ST5	Q8IZT8	346 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	IQCF1	Q8N6M8	205 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	OR5L1	Q8NGL2	311 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	TEX47	Q8TBZ9	253 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	SLCO4A1	Q96BD0	722 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	C1QTNF5	Q9BXJ0	243 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	BEX2	Q9BXY8	128 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	EGLN1	Q9GZT9	426 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	SHARPIN	Q9H0F6	387 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	WDR76	Q9H967	626 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	CMC2	Q9NRP2	79 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	LPAR3	Q9UBY5	353 aa		13.13	□□□□□ -0.31
PLD3-223	ENST00000600948	RIIAD1	A6NNX1	92 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	FAM157A	C9JC47	383 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	CLDN25	C9JDP6	229 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948		F5H5K5	113 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948		H3BN98	237 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	IFNG	P01579	166 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	FAM157C	P0CG43	387 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	FMO3	P31513	532 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	GRK5	P34947	590 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	TNFAIP6	P98066	277 aa	Predicted RBP	13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	MVK	Q03426	396 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	FAM120AOS	Q5T036	256 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF511	Q8NB15	262 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	YY1AP1	Q9H869	796 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	TREM2	Q9NZC2	230 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	DNAJB9	Q9UBS3	223 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	WIPI2	Q9Y4P8	454 aa		13.12	□□□□□ -0.31
PLD3-223	ENST00000600948	WNK2	Q9Y3S1	2297 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	E2F6	O75461	281 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF3	P17036	446 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	PRKACG	P22612	351 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	OTX1	P32242	354 aa	Predicted RBP	13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	ENTPD1	P49961	510 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	PCK2	Q16822	640 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	CR1L	Q2VPA4	569 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	TEX30	Q5JUR7	227 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	LINC01590	Q5TEZ4	76 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	OR2T2	Q6IF00	324 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	IL17REL	Q6ZVW7	336 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	NAA40	Q86UY6	237 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	OR5AS1	Q8N127	324 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	OR2Z1	Q8NG97	314 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	CCL17	Q92583	94 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	HCAR1	Q9BXC0	346 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	MED20	Q9H944	212 aa		13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	DDX28	Q9NUL7	540 aa	Known RBP	13.11	□□□□□ -0.31
PLD3-223	ENST00000600948	FAM183A	A6NL82	134 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948		B4DSR2	109 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948		M0R135	149 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	SPARC	P09486	303 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	OSM	P13725	252 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	ANXA8	P13928	327 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	TNFSF4	P23510	183 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	DVL1P1	P54792	670 aa	Predicted RBP	13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	TPTE	P56180	551 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	HNRNPA0	Q13151	305 aa	Known RBP	13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	ACSM5	Q6NUN0	579 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	SLC27A4	Q6P1M0	643 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	DCXR	Q7Z4W1	244 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	OR8G5	Q8NG78	346 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	OR6K6	Q8NGW6	343 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	RAB1C	Q92928	201 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF799	Q96GE5	643 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF556	Q9HAH1	456 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	NTN4	Q9HB63	628 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	DCAF16	Q9NXF7	216 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	MXRA5	Q9NR99	2828 aa		13.1	□□□□□ -0.31
PLD3-223	ENST00000600948	ARHGAP32	A7KAX9	2087 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	IQCF6	A8MYZ5	107 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	ZNF593	O00488	134 aa	Predicted RBP	13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	DEAF1	O75398	565 aa	Predicted RBP	13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	TIPRL	O75663	272 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	ATP5H	O75947	161 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	LCAT	P04180	440 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	ANOS1	P23352	680 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	POU1F1	P28069	291 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	RBMX	P38159	391 aa	Known RBP	13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	RASSF2	P50749	326 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	BLVRA	P53004	296 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	CDK5	Q00535	292 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	SLC3A1	Q07837	685 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	GK2	Q14410	553 aa	Predicted RBP	13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	GINS1	Q14691	196 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	SHQ1	Q6PI26	577 aa	Known RBP	13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	ST7L	Q8TDW4	575 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	ITLN1	Q8WWA0	313 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	SPTSSA	Q969W0	71 aa		13.09	□□□□□ -0.31
PLD3-223	ENST00000600948	UTP4	Q969X6	686 aa	Known RBP	13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms