RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 NFYCQ13952 458 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 PDCD1Q15116 288 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 MPPED2Q15777 294 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 ANKDD1AQ495B1 522 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 MESTQ5EB52 335 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 RABL3Q5HYI8 236 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 GPR157Q5UAW9 335 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 C1orf94Q6P1W5 598 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 TBPL2Q6SJ96 375 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 Q6ZPA2 131 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 DCDC5Q6ZRR9 648 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 TSEN54Q7Z6J9 526 aaKnown RBP5.05□□□□□ -1.6
VRK3-220ENST00000600259 NAA40Q86UY6 237 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 LDLRAD3Q86YD5 345 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 MICU2Q8IYU8 434 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 CELF2-AS1Q8N7Q2 184 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 C19orf18Q8NEA5 215 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 OR8B3Q8NGG8 313 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 SLC26A7Q8TE54 656 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 SSMEM1Q8WWF3 244 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 RASSF5Q8WWW0 418 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 RASD2Q96D21 266 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 MAGEB18Q96M61 343 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 COG8Q96MW5 612 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 WDFY2Q96P53 400 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 OR8B2Q96RD0 313 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 RABEP2Q9H5N1 569 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 ACOXLQ9NUZ1 547 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 PTTG3PQ9NZH4 202 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 ASH2LQ9UBL3 628 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 CLN8Q9UBY8 286 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 ATPIF1Q9UII2 106 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 BAG5Q9UL15 447 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 TMCC3Q9ULS5 477 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 COA3Q9Y2R0 106 aaPredicted RBP5.05□□□□□ -1.6
VRK3-220ENST00000600259 ADAM18Q9Y3Q7 739 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 TENM3Q9P273 2699 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 IGHV1-69DA0A0B4J2H0 117 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 TEX13CA0A0J9YWL9 993 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 A0A0U1RQK1 487 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 MEGF11A6BM72 1044 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 C5orf63A6NC05 138 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 G3V4G9 280 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 J3KTA2 159 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 DCTN6O00399 190 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 ENSAO43768 121 aaKnown RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 FAM20BO75063 409 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 TOX4O94842 621 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 IGHV1-69P01742 117 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 ANOS1P23352 680 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 KDELR2P33947 212 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 CDKN2AP42771 156 aaKnown RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 RGS6P49758 472 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 NPY4RP50391 375 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 FXYD6P3P58550 94 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 AQP6Q13520 282 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 CYBRD1Q53TN4 286 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 SAMD5Q5TGI4 173 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 TMPRSS11FQ6ZWK6 438 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 NLRC3Q7RTR2 1065 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 OAFQ86UD1 273 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 NRMQ8IXM6 262 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 RNF113BQ8IZP6 322 aaKnown RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 C1orf87Q8N0U7 546 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 OR13C2Q8NGS9 318 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 FAM110DQ8TAY7 271 aaPredicted RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 TBC1D15Q8TC07 691 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 ERGIC1Q969X5 290 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 APOBEC3DQ96AK3 386 aaPredicted RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 PRRC1Q96M27 445 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 ZNF582Q96NG8 517 aaPredicted RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 PCGF1Q9BSM1 259 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 RASSF4Q9H2L5 321 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 WDR76Q9H967 626 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 NMNAT1Q9HAN9 279 aaPredicted RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 SMURF1Q9HCE7 757 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 TCF7L1Q9HCS4 588 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 TMEM100Q9NV29 134 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 PLA2G2EQ9NZK7 142 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 VSX1Q9NZR4 365 aaPredicted RBP5.04□□□□□ -1.6
VRK3-220ENST00000600259 LHFPL6Q9Y693 200 aa5.04□□□□□ -1.6
VRK3-220ENST00000600259 ZNF816-ZNF321PA0A0X1KG74 233 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 LRRC30A6NM36 301 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 EFCAB9A8MZ26 197 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 LGALS8O00214 317 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ANGPT2O15123 496 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 SLC16A7O60669 478 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 KHDRBS3O75525 346 aaKnown RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 PPP1R3DO95685 299 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 TXNDC12O95881 172 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 LHBP01229 141 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ACSM4P0C7M7 580 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 AMY2BP19961 511 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 FPR3P25089 353 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 YAP1P46937 504 aaKnown RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 SLC9A3P48764 834 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ARF6P62330 175 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 SELENOWP63302 87 aa5.03□□□□□ -1.6
VRK3-220ENST00000600259 ELF3P78545 371 aaPredicted RBP5.03□□□□□ -1.6
VRK3-220ENST00000600259 DBPQ10586 325 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms