RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 RADILQ96JH8 1075 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 KCNS3Q9BQ31 491 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 CENPMQ9NSP4 180 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 TMEM14AQ9Y6G1 99 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 ROS1P08922 2347 aa16.26■□□□□ 0.19
CCDC9-205ENST00000600117 PLCE1Q9P212 2302 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 ICMTO60725 284 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 OR2T7P0C7T2 308 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 OPRL1P41146 370 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 SPATC1Q76KD6 591 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 RHOUQ7L0Q8 258 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 SSX6Q7RTT6 188 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 OR2T27Q8NH04 317 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 RHNO1Q9BSD3 238 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 PLCXD1Q9NUJ7 323 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 PCDHGB5Q9Y5G0 923 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 ARID1AO14497 2285 aa16.25■□□□□ 0.19
CCDC9-205ENST00000600117 RAI1Q7Z5J4 1906 aaPredicted RBP16.24■□□□□ 0.19
CCDC9-205ENST00000600117 A0A1W2PQL4 384 aaPredicted RBP16.24■□□□□ 0.19
CCDC9-205ENST00000600117 E7EQL1 145 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF670-ZNF695F2Z2N8 137 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 DENRO43583 198 aaKnown RBP16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ATE1O95260 518 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 CCNOP22674 350 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 NR4A1P22736 598 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 PCSK6P29122 969 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ATP6V1E1P36543 226 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 CXCR4P61073 352 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ROM1Q03395 351 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF85Q03923 595 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 RAB40BQ12829 278 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF672Q499Z4 452 aaPredicted RBP16.24■□□□□ 0.19
CCDC9-205ENST00000600117 C6orf141Q5SZD1 244 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF101Q8IZC7 436 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 NUP37Q8NFH4 326 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 OR10H4Q8NGA5 316 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 OR52I1Q8NGK6 324 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ASB17Q8WXJ9 295 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 CNBD2Q96M20 576 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 DCLRE1CQ96SD1 692 aaKnown RBP16.24■□□□□ 0.19
CCDC9-205ENST00000600117 TBX5Q99593 518 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 COPS4Q9BT78 406 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 TTTY10Q9BZA0 68 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 SLCO1C1Q9NYB5 712 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 MYRFQ9Y2G1 1151 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 ATP23Q9Y6H3 246 aa16.24■□□□□ 0.19
CCDC9-205ENST00000600117 PHYHO14832 338 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 XPNPEP2O43895 674 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 IGHA1P01876 353 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 ADRA2AP08913 450 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 ACSM4P0C7M7 580 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 KLHL22Q53GT1 634 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF684Q5T5D7 378 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 KRT80Q6KB66 452 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF322Q6U7Q0 402 aaPredicted RBP16.23■□□□□ 0.19
CCDC9-205ENST00000600117 LRRN1Q6UXK5 716 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 RFPL4BQ6ZWI9 263 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 AKAP1Q92667 903 aaKnown RBP eCLIP16.23■□□□□ 0.19
CCDC9-205ENST00000600117 C4orf45Q96LM5 186 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 OR8B4Q96RC9 309 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 KCNJ15Q99712 375 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 PLEKHF2Q9H8W4 249 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 FGF20Q9NP95 211 aaPredicted RBP16.23■□□□□ 0.19
CCDC9-205ENST00000600117 PCDHGB1Q9Y5G3 927 aa16.23■□□□□ 0.19
CCDC9-205ENST00000600117 F5H5K5 113 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 M0R135 149 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 SMPD2O60906 423 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 NGFP01138 241 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 H2BFMP0C1H6 154 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 FAM157BP0CG42 384 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 PRKXP51817 358 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 UCP2P55851 309 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 GRB2P62993 217 aaKnown RBP16.22■□□□□ 0.19
CCDC9-205ENST00000600117 ACTC1P68032 377 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 ACTA1P68133 377 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 GALK2Q01415 458 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 EGR3Q06889 387 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 SNTB2Q13425 540 aaKnown RBP16.22■□□□□ 0.19
CCDC9-205ENST00000600117 MSMPQ1L6U9 139 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 KCTD18Q6PI47 426 aaPredicted RBP16.22■□□□□ 0.19
CCDC9-205ENST00000600117 DEGS2Q6QHC5 323 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 COLCA1Q6ZS62 124 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 NAA40Q86UY6 237 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 BPIFB6Q8NFQ5 453 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 IPCEF1Q8WWN9 437 aaPredicted RBP16.22■□□□□ 0.19
CCDC9-205ENST00000600117 GGHQ92820 318 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 SPTSSAQ969W0 71 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF799Q96GE5 643 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 ZNF649Q9BS31 505 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 Q9H521 79 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 TBCCD1Q9NVR7 557 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 FKBP14Q9NWM8 211 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 UBAP1Q9NZ09 502 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 PSORS1C1Q9UIG5 152 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 POU2F3Q9UKI9 436 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 GRIP1Q9Y3R0 1128 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 LRP12Q9Y561 859 aa16.22■□□□□ 0.19
CCDC9-205ENST00000600117 PSMD9O00233 223 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 SLC1A7O00341 560 aa16.21■□□□□ 0.19
CCDC9-205ENST00000600117 HS3ST1O14792 307 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms