RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 KLHL12Q53G59 568 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 LINC01590Q5TEZ4 76 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 CPOQ8IVL8 374 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 CENPNQ96H22 339 aaPredicted RBP24.03■■□□□ 1.44
SSBP4-206ENST00000599699 INTS14Q96SY0 518 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 CHODLQ9H9P2 273 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 MSL2Q9HCI7 577 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 CENPMQ9NSP4 180 aa24.03■■□□□ 1.44
SSBP4-206ENST00000599699 CR1P17927 2039 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 ZSCAN5BA6NJL1 495 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 IGHV1-46P01743 117 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 LCATP04180 440 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 ESRRGP62508 458 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 KRTAP1-1Q07627 177 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 HLXQ14774 488 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-206ENST00000599699 KRTAP27-1Q3LI81 207 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 TEX30Q5JUR7 227 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 OR10S1Q8NGN2 331 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 OR6N2Q8NGY6 317 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 HAVCR1Q96D42 359 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 ZMYND19Q96E35 227 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-206ENST00000599699 COPS4Q9BT78 406 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 SAP30LQ9HAJ7 183 aa24.02■■□□□ 1.44
SSBP4-206ENST00000599699 NF1P21359 2839 aa24.02■■□□□ 1.43
SSBP4-206ENST00000599699 NIPBLQ6KC79 2804 aaeCLIP24.02■■□□□ 1.43
SSBP4-206ENST00000599699 IGHV4-61A0A0C4DH41 118 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 M0R135 149 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 CDC14BO60729 498 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 RAC2P15153 192 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 ACHEP22303 614 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 SLC6A9P48067 706 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 RPS7P62081 194 aaKnown RBP24.01■■□□□ 1.43
SSBP4-206ENST00000599699 MRPS11P82912 194 aaKnown RBP24.01■■□□□ 1.43
SSBP4-206ENST00000599699 RIN1Q13671 783 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 EIF2B1Q14232 305 aaKnown RBP24.01■■□□□ 1.43
SSBP4-206ENST00000599699 PTGES3Q15185 160 aaKnown RBP24.01■■□□□ 1.43
SSBP4-206ENST00000599699 PCK2Q16822 640 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 SPATC1Q76KD6 591 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 YIPF5Q969M3 257 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 SLAMF6Q96DU3 332 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 ZNF799Q96GE5 643 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 C1QTNF5Q9BXJ0 243 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 GABARAPL1Q9H0R8 117 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 ZDHHC8Q9ULC8 765 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 OAZ3Q9UMX2 235 aa24.01■■□□□ 1.43
SSBP4-206ENST00000599699 C2CD3Q4AC94 2353 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 KITLGP21583 273 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 FAM209AQ5JX71 171 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 KDM4DQ6B0I6 523 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 CXXC5Q7LFL8 322 aaKnown RBP24■■□□□ 1.43
SSBP4-206ENST00000599699 DPY19L4Q7Z388 723 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 NAA40Q86UY6 237 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 PRRG3Q9BZD7 231 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 EGLN1Q9GZT9 426 aa24■■□□□ 1.43
SSBP4-206ENST00000599699 DDX28Q9NUL7 540 aaKnown RBP24■■□□□ 1.43
SSBP4-206ENST00000599699 HIVEP2P31629 2446 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 SAC3D1A6NKF1 404 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 PRODHO43272 600 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 CD5LO43866 347 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 IGFBP5P24593 272 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 GPR6P46095 362 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-206ENST00000599699 PPP2R2BQ00005 443 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 MALLQ13021 153 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 ZFP1Q6P2D0 407 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 FBXW12Q6X9E4 464 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 COLCA1Q6ZS62 124 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 USP51Q70EK9 711 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 C10orf67Q8IYJ2 551 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 OR5AS1Q8N127 324 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 BBS1Q8NFJ9 593 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 RAB3IPQ96QF0 476 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-206ENST00000599699 DIRC2Q96SL1 478 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 YAE1D1Q9NRH1 226 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 ZNF275Q9NSD4 429 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-206ENST00000599699 ENOPH1Q9UHY7 261 aa23.99■■□□□ 1.43
SSBP4-206ENST00000599699 IGHV1-69-2A0A0G2JMI3 117 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 ZNF878C9JN71 531 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 PPIHO43447 177 aaKnown RBP23.98■■□□□ 1.43
SSBP4-206ENST00000599699 PRKXP51817 358 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 OR2T2Q6IF00 324 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 SHFQ7M4L6 423 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 ST7LQ8TDW4 575 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 PKP2Q99959 881 aa23.98■■□□□ 1.43
SSBP4-206ENST00000599699 NSD1Q96L73 2696 aaPredicted RBP23.98■■□□□ 1.43
SSBP4-206ENST00000599699 INAFM1C9JVW0 142 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 TNFSF4P23510 183 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 SLC15A1P46059 708 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 CHN2P52757 468 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 TMEM33P57088 247 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 TNFAIP6P98066 277 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-206ENST00000599699 ZFHX3Q15911 3703 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 SLC35D3Q5M8T2 416 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 CYB5R2Q6BCY4 276 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 TIGD4Q8IY51 512 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 OR2Z1Q8NG97 314 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 ELMOD3Q96FG2 381 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 CIB1Q99828 191 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 MARCH7Q9H992 704 aa23.97■■□□□ 1.43
SSBP4-206ENST00000599699 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.97■■□□□ 1.43
SSBP4-206ENST00000599699 N6AMT1Q9Y5N5 214 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms