RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SCRN3Q0VDG4 424 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 DBPQ10586 325 aaPredicted RBP12.32□□□□□ -0.44
IRF3-223ENST00000599223 HLXQ14774 488 aaPredicted RBP12.32□□□□□ -0.44
IRF3-223ENST00000599223 PRR31Q5SQ13 230 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 C1orf94Q6P1W5 598 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 ZNF730Q6ZMV8 503 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 LRRC28Q86X40 367 aaPredicted RBP12.32□□□□□ -0.44
IRF3-223ENST00000599223 OR5AS1Q8N127 324 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 KLHL36Q8N4N3 616 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 PAPD5Q8NDF8 572 aaKnown RBP12.32□□□□□ -0.44
IRF3-223ENST00000599223 OR10AD1Q8NGE0 317 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 EME1Q96AY2 570 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 SAMD8Q96LT4 415 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 ZNF570Q96NI8 536 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 PKP2Q99959 881 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 FNDC11Q9BVV2 318 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 CHID1Q9BWS9 393 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 SYT4Q9H2B2 425 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 C8orf4Q9NR00 106 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 ASH2LQ9UBL3 628 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 NUP50Q9UKX7 468 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 AUP1Q9Y679 476 aa12.32□□□□□ -0.44
IRF3-223ENST00000599223 IGHV3OR16-10A0A075B7F0 116 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 IGHV3-64DA0A0J9YX35 117 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 PRSS37A4D1T9 235 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 HTR3EA5X5Y0 456 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 ZNF205O95201 554 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 GPANK1O95872 356 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 IGHV4-38-2P0DP08 117 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 PRTN3P24158 256 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
IRF3-223ENST00000599223 PRSS12P56730 875 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 FXYD6P3P58550 94 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 PAX2Q02962 417 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 AQP6Q13520 282 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 KRR1Q13601 381 aaKnown RBP12.31□□□□□ -0.44
IRF3-223ENST00000599223 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
IRF3-223ENST00000599223 MBOAT2Q6ZWT7 520 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 ZER1Q7Z7L7 766 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 JAZF1Q86VZ6 243 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 ZNF420Q8TAQ5 688 aaPredicted RBP12.31□□□□□ -0.44
IRF3-223ENST00000599223 LRTOMTQ8WZ04 291 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 SLCO4A1Q96BD0 722 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 CENPNQ96H22 339 aaPredicted RBP12.31□□□□□ -0.44
IRF3-223ENST00000599223 FAM46AQ96IP4 442 aaKnown RBP12.31□□□□□ -0.44
IRF3-223ENST00000599223 HSH2DQ96JZ2 352 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 GCM1Q9NP62 436 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 PLEK2Q9NYT0 353 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 GRHPRQ9UBQ7 328 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 IL20RAQ9UHF4 553 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
IRF3-223ENST00000599223 MDFIC2A0A1B0GVS7 189 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 RER1O15258 196 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 SELEP16581 610 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 TNFRSF1AP19438 455 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 TNFSF4P23510 183 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 CD80P33681 288 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 MDH2P40926 338 aaKnown RBP12.3□□□□□ -0.44
IRF3-223ENST00000599223 GUCA1AP43080 201 aaPredicted RBP12.3□□□□□ -0.44
IRF3-223ENST00000599223 HSPA13P48723 471 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 ATP6AP1Q15904 470 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 ANKDD1AQ495B1 522 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 ZBED5Q49AG3 693 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 IFI44LQ53G44 452 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 ARL9Q6T311 187 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 PTCHD4Q6ZW05 846 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 TMPRSS11FQ6ZWK6 438 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 CBLL1Q75N03 491 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 SLC7A13Q8TCU3 470 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 DNAJC9Q8WXX5 260 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 DACT3Q96B18 629 aaPredicted RBP12.3□□□□□ -0.44
IRF3-223ENST00000599223 HAVCR1Q96D42 359 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 ZNF184Q99676 751 aaPredicted RBP12.3□□□□□ -0.44
IRF3-223ENST00000599223 C9orf16Q9BUW7 83 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 Q9H521 79 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 PTTG3PQ9NZH4 202 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 IL19Q9UHD0 177 aa12.3□□□□□ -0.44
IRF3-223ENST00000599223 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
IRF3-223ENST00000599223 H0YL77 283 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 SOCS2O14508 198 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 XKRYO14609 159 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 MLNRO43193 412 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 SLC16A7O60669 478 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 CYB5R3P00387 301 aaPredicted RBP12.29□□□□□ -0.44
IRF3-223ENST00000599223 PEX2P28328 305 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 PAX8Q06710 450 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 MEP1BQ16820 701 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 LRRC36Q1X8D7 754 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 ESCO2Q56NI9 601 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 FAM201AQ5SY85 155 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 OGFRL1Q5TC84 451 aaPredicted RBP12.29□□□□□ -0.44
IRF3-223ENST00000599223 OR2T2Q6IF00 324 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 IZUMO2Q6UXV1 221 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
IRF3-223ENST00000599223 OR1F12Q8NHA8 337 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 NRG4Q8WWG1 115 aa12.29□□□□□ -0.44
IRF3-223ENST00000599223 MEGF10Q96KG7 1140 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms