RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	KLB	Q86Z14	1044 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	OR52E2	Q8NGJ4	325 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	OR5L1	Q8NGL2	311 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	OR13G1	Q8NGZ3	307 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	OR52J3	Q8NH60	311 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	APOBEC3D	Q96AK3	386 aa	Predicted RBP	8.81	□□□□□ -1
LSM4-205	ENST00000597776	ZNF582	Q96NG8	517 aa	Predicted RBP	8.81	□□□□□ -1
LSM4-205	ENST00000597776	COQ7	Q99807	217 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	HOPX	Q9BPY8	73 aa	Predicted RBP	8.81	□□□□□ -1
LSM4-205	ENST00000597776	SLC30A2	Q9BRI3	323 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	TMEM246	Q9BRR3	403 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	HDHD2	Q9H0R4	259 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	UNKL	Q9H9P5	680 aa	Known RBP	8.81	□□□□□ -1
LSM4-205	ENST00000597776	ATPIF1	Q9UII2	106 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	RPS6KA6	Q9UK32	745 aa		8.81	□□□□□ -1
LSM4-205	ENST00000597776	TRAV40	A0A0B4J280	105 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	IGHV2-70D	A0A0C4DH43	119 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	UNC119B	A6NIH7	251 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	IQCF6	A8MYZ5	107 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776		J3QW42	95 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	IFNL4	K9M1U5	179 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	TXNDC12	O95881	172 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	RNASE1	P07998	156 aa	Known RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776	RPS6KA3	P51812	740 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	GNB2	P62879	340 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	ZNF404	Q494X3	552 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	LEG1	Q6P5S2	330 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	SMARCD3	Q6STE5	483 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	BTNL3	Q6UXE8	466 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	DPY19L2P2	Q6ZN68	376 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	LINC00346	Q8IVM7	164 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	OR6V1	Q8N148	313 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	C19orf18	Q8NEA5	215 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	GJC3	Q8NFK1	279 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	SLC26A10	Q8NG04	563 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	FANK1	Q8TC84	345 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	SLC25A28	Q96A46	364 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	DACT3	Q96B18	629 aa	Predicted RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776	UPRT	Q96BW1	309 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	NEIL1	Q96FI4	390 aa	Predicted RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776	C7orf34	Q96L11	122 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	ERMAP	Q96PL5	475 aa	Predicted RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776	FUZ	Q9BT04	418 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	CDADC1	Q9BWV3	514 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	ZMAT3	Q9HA38	289 aa	Known RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776	SRA1	Q9HD15	236 aa	Known RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776	AURKC	Q9UQB9	309 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	FAM32A	Q9Y421	112 aa	Known RBP	8.8	□□□□□ -1
LSM4-205	ENST00000597776		V9GYQ6	96 aa		8.8	□□□□□ -1
LSM4-205	ENST00000597776	LRRC30	A6NM36	301 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776		F5H5K5	113 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	PLAT	P00750	562 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	ACSM4	P0C7M7	580 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	RHCE	P18577	417 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	OMG	P23515	440 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	FPR3	P25089	353 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	CRABP1	P29762	137 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	MTNR1A	P48039	350 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	PITPNB	P48739	271 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	COX10	Q12887	443 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	KRTAP27-1	Q3LI81	207 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	SLC18B1	Q6NT16	456 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	DNM1P34	Q6PK57	102 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	LYPD2	Q6UXB3	125 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	LRRN1	Q6UXK5	716 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	BRD3OS	Q6XYD6	125 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	COLCA1	Q6ZS62	124 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	C9orf139	Q6ZV77	190 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	NAA40	Q86UY6	237 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	RNF148	Q8N7C7	305 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	OR8B3	Q8NGG8	313 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	OR4K13	Q8NH42	304 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	RAB40A	Q8WXH6	277 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	PLEKHA8	Q96JA3	519 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	DHRS1	Q96LJ7	313 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	OR8B2	Q96RD0	313 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	NMNAT3	Q96T66	252 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	PITX2	Q99697	317 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	HCAR1	Q9BXC0	346 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	FN3K	Q9H479	309 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	CCDC134	Q9H6E4	229 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	ZNF696	Q9H7X3	374 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	EFCAB1	Q9HAE3	211 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	RPRD1B	Q9NQG5	326 aa	Known RBP	8.79	□□□□□ -1
LSM4-205	ENST00000597776	TMEM100	Q9NV29	134 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	ZNF446	Q9NWS9	450 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	ABCD2	Q9UBJ2	740 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	MIOX	Q9UGB7	285 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776	B9D1	Q9UPM9	204 aa		8.79	□□□□□ -1
LSM4-205	ENST00000597776		A0A1B0GWJ7	208 aa		8.78	□□□□□ -1
LSM4-205	ENST00000597776	CLDN34	H7C241	214 aa		8.78	□□□□□ -1
LSM4-205	ENST00000597776	HOXA3	O43365	443 aa	Predicted RBP	8.78	□□□□□ -1
LSM4-205	ENST00000597776	CCDC22	O60826	627 aa		8.78	□□□□□ -1
LSM4-205	ENST00000597776	FAM20B	O75063	409 aa		8.78	□□□□□ -1
LSM4-205	ENST00000597776	PPIAL4G	P0DN37	164 aa		8.78	□□□□□ -1
LSM4-205	ENST00000597776	HIST1H1C	P16403	213 aa	Known RBP	8.78	□□□□□ -1
LSM4-205	ENST00000597776	MDK	P21741	143 aa	Predicted RBP	8.78	□□□□□ -1
LSM4-205	ENST00000597776	MDH1	P40925	334 aa	Known RBP	8.78	□□□□□ -1
LSM4-205	ENST00000597776	PSME3	P61289	254 aa		8.78	□□□□□ -1
LSM4-205	ENST00000597776	IL13RA1	P78552	427 aa		8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms