RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ZBTB49Q6ZSB9 765 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 SHFQ7M4L6 423 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 OR5AS1Q8N127 324 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 ZNF283Q8N7M2 679 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 OR5L1Q8NGL2 311 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 TMEM163Q8TC26 289 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 EME1Q96AY2 570 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 CMBLQ96DG6 245 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 TEAD3Q99594 435 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 SLC29A1Q99808 456 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 MS4A5Q9H3V2 200 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 PNRC2Q9NPJ4 139 aaKnown RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 TBCCD1Q9NVR7 557 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 SLCO1C1Q9NYB5 712 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 FBXO9Q9UK97 447 aaPredicted RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 ROS1P08922 2347 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 ARID1AO14497 2285 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 CHD3Q12873 2000 aaKnown RBP9.48□□□□□ -0.89
LIG1-211ENST00000596457 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 PLSCR5A0PG75 271 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 M0R135 149 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 TBX1O43435 398 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 SPRY3O43610 288 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 IGHV3-13P01766 116 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 MT-ND5P03915 603 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 ALPLP05186 524 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 LYNP07948 512 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 INHBBP09529 407 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 H2BFMP0C1H6 154 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 ACSM4P0C7M7 580 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 DAOP14920 347 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 SLC2A5P22732 501 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 HSD11B1P28845 292 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 RGS6P49758 472 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 PDLIM4P50479 330 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 PRSS12P56730 875 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 CDC42P60953 191 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 LRRC36Q1X8D7 754 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 TEX30Q5JUR7 227 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 MBNL2Q5VZF2 373 aaKnown RBP9.48□□□□□ -0.89
LIG1-211ENST00000596457 MEPCEQ7L2J0 689 aaKnown RBP9.48□□□□□ -0.89
LIG1-211ENST00000596457 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.48□□□□□ -0.89
LIG1-211ENST00000596457 TIGD4Q8IY51 512 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 C1orf174Q8IYL3 243 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 GALNT4Q8N4A0 578 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 FAM81AQ8TBF8 368 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 NEU4Q8WWR8 484 aaPredicted RBP9.48□□□□□ -0.89
LIG1-211ENST00000596457 FAM168AQ92567 244 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 APOBEC3DQ96AK3 386 aaPredicted RBP9.48□□□□□ -0.89
LIG1-211ENST00000596457 ZNF799Q96GE5 643 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 ABHD6Q9BV23 337 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 GABARAPL3Q9BY60 117 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 TTTY10Q9BZA0 68 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 TOR3AQ9H497 397 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 BRD7Q9NPI1 651 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 USE1Q9NZ43 259 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 DNAJC27Q9NZQ0 273 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 ATPIF1Q9UII2 106 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 LAMP5Q9UJQ1 280 aa9.48□□□□□ -0.89
LIG1-211ENST00000596457 IGHV4-30-2A0A087WSY4 118 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 CCDC182A6NF36 153 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 C17orf100A8MU93 164 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 ZNF878C9JN71 531 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 ANXA2P07355 339 aaKnown RBP9.47□□□□□ -0.89
LIG1-211ENST00000596457 SLC2A1P11166 492 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 ANPEPP15144 967 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 MAGEB1P43366 347 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 ZNF81P51508 661 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 CCL8P80075 99 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 MALLQ13021 153 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 PSG7Q13046 419 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 RCN1Q15293 331 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 TMEM255AQ5JRV8 349 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 OR2T2Q6IF00 324 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 SLC16A9Q7RTY1 509 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 ST7LQ8TDW4 575 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 UBASH3BQ8TF42 649 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 UBE2FQ969M7 185 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 COG8Q96MW5 612 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 AMELYQ99218 206 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 KCNJ15Q99712 375 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 REG4Q9BYZ8 158 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 MARCH7Q9H992 704 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 MSL2Q9HCI7 577 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 DECR2Q9NUI1 292 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 IMPAD1Q9NX62 359 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 PURGQ9UJV8 347 aaKnown RBP9.47□□□□□ -0.89
LIG1-211ENST00000596457 GMPPBQ9Y5P6 360 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 USF3Q68DE3 2245 aa9.47□□□□□ -0.89
LIG1-211ENST00000596457 PSMD9O00233 223 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 ICMTO60725 284 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 CDC14BO60729 498 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 HPXP02790 462 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 COL8A2P25067 703 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 SLC15A1P46059 708 aa9.46□□□□□ -0.9
LIG1-211ENST00000596457 CX3CR1P49238 355 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms