RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 ARL9Q6T311 187 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 UNQ6126/PRO20091Q6UXV3 157 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 ZBTB49Q6ZSB9 765 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 FAM81AQ8TBF8 368 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 EME1Q96AY2 570 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 ZNF799Q96GE5 643 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 DCLRE1CQ96SD1 692 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 TEAD3Q99594 435 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 TTTY10Q9BZA0 68 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 DNAJC27Q9NZQ0 273 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 FLNAP21333 2647 aaKnown RBP11.77□□□□□ -0.52
SHKBP1-207ENST00000595631 VPS13CQ709C8 3753 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 IGHV4-30-2A0A087WSY4 118 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 ZSCAN5BA6NJL1 495 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 ZNF878C9JN71 531 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 E9PQ18 207 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 LYNX1G3V0Z9 82 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 NCR1O76036 304 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 LCATP04180 440 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 LYNX1P0DP58 116 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 SLC2A1P11166 492 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 CD99P14209 185 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 MAGEB1P43366 347 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 TPTEP56180 551 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 SELENOVP59797 346 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 TAF13Q15543 124 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 CARTPTQ16568 116 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 LRRC36Q1X8D7 754 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 SNAI3Q3KNW1 292 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 LCN1P1Q5VSP4 162 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 NXNL2Q5VZ03 156 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 MEPCEQ7L2J0 689 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 SHFQ7M4L6 423 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 GALNT4Q8N4A0 578 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 RFLNBQ8N5W9 214 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 MAPK1IP1LQ8NDC0 245 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 OTOSQ8NHW6 89 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 APOBEC3DQ96AK3 386 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 CMBLQ96DG6 245 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 DLL4Q9NR61 685 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 AASSQ9UDR5 926 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 N6AMT1Q9Y5N5 214 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 DYSFO75923 2080 aa11.77□□□□□ -0.53
SHKBP1-207ENST00000595631 C17orf100A8MU93 164 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 PRR32B1ATL7 298 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 PSMD9O00233 223 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 TIMM8AO60220 97 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 HPXP02790 462 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 PEX2P28328 305 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 SLC6A9P48067 706 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 RGS6P49758 472 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 MMP15P51511 669 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 ELF3P78545 371 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 HNRNPA0Q13151 305 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 TRIP10Q15642 601 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 TSTQ16762 297 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 SPRNQ5BIV9 151 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 COLCA1Q6ZS62 124 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 SLC16A9Q7RTY1 509 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 OR5AS1Q8N127 324 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 SNX33Q8WV41 574 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 RNF133Q8WVZ7 376 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 SPTSSAQ969W0 71 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 HRASLS5Q96KN8 279 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 KCNJ15Q99712 375 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 C1QTNF5Q9BXJ0 243 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 MS4A5Q9H3V2 200 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 ADGRL4Q9HBW9 690 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 MSL2Q9HCI7 577 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 H2AFY2Q9P0M6 372 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 PURGQ9UJV8 347 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 COPS3Q9UNS2 423 aa11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 MAP1AP78559 2803 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-207ENST00000595631 ACANP16112 2415 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 H3BSA7 217 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 DLGAP1O14490 977 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 SPRY3O43610 288 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 LILRA1O75019 489 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 APOL3O95236 402 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 IGHV1-46P01743 117 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 LYNP07948 512 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 DAOP14920 347 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 ALOX5APP20292 161 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 OPRL1P41146 370 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 CX3CR1P49238 355 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 CDC42P60953 191 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 GGTLC2Q14390 218 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 OR2T2Q6IF00 324 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 CLEC2AQ6UVW9 174 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 LRRN1Q6UXK5 716 aa11.75□□□□□ -0.53
SHKBP1-207ENST00000595631 Q6ZR03 302 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms