RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 SLAMF6Q96DU3 332 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 COX4I2Q96KJ9 171 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 INTS14Q96SY0 518 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 RBM4BQ9BQ04 359 aaKnown RBP13.12□□□□□ -0.31
USE1-206ENST00000595101 RAB1BQ9H0U4 201 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 PTTG3PQ9NZH4 202 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 ATPIF1Q9UII2 106 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 KLHDC2Q9Y2U9 406 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 CSPG4Q6UVK1 2322 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 A0A096LNT2 108 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 BAG2O95816 211 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 MRPL3P09001 348 aaKnown RBP13.12□□□□□ -0.31
USE1-206ENST00000595101 INHBBP09529 407 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 SLC2A1P11166 492 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 CCL8P80075 99 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 SPRNQ5BIV9 151 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 ARL9Q6T311 187 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 COLCA1Q6ZS62 124 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 TEAD3Q99594 435 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 ABHD6Q9BV23 337 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 GABARAPL3Q9BY60 117 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 REG4Q9BYZ8 158 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 MSL2Q9HCI7 577 aa13.12□□□□□ -0.31
USE1-206ENST00000595101 DDX28Q9NUL7 540 aaKnown RBP13.12□□□□□ -0.31
USE1-206ENST00000595101 ZSCAN5BA6NJL1 495 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 PRODHO43272 600 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 DAOP14920 347 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 COL8A2P25067 703 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 PRKXP51817 358 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 SELENOVP59797 346 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 AADACL4Q5VUY2 407 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 CLEC2AQ6UVW9 174 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 C10orf105Q8TEF2 133 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 FAM168AQ92567 244 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 COPS4Q9BT78 406 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 C1QTNF5Q9BXJ0 243 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 MS4A5Q9H3V2 200 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 SLCO1C1Q9NYB5 712 aa13.11□□□□□ -0.31
USE1-206ENST00000595101 C17orf100A8MU93 164 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 M0R135 149 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 SPRY3O43610 288 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 LILRA1O75019 489 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 OTX1P32242 354 aaPredicted RBP13.1□□□□□ -0.31
USE1-206ENST00000595101 SNAI3Q3KNW1 292 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 Q6ZR03 302 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 OR5AS1Q8N127 324 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 TMEM163Q8TC26 289 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 ZNF799Q96GE5 643 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 RHNO1Q9BSD3 238 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 N6AMT1Q9Y5N5 214 aa13.1□□□□□ -0.31
USE1-206ENST00000595101 PRR32B1ATL7 298 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 LCATP04180 440 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 SLC6A9P48067 706 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 ALDH3A2P51648 485 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 BLVRAP53004 296 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 ECH1Q13011 328 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 TSTQ16762 297 aaKnown RBP13.09□□□□□ -0.31
USE1-206ENST00000595101 OR2T2Q6IF00 324 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 UNQ6126/PRO20091Q6UXV3 157 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 OTOSQ8NHW6 89 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 THEM6Q8WUY1 208 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 YIPF5Q969M3 257 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 APOBEC3DQ96AK3 386 aaPredicted RBP13.09□□□□□ -0.31
USE1-206ENST00000595101 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 DCLRE1CQ96SD1 692 aaKnown RBP13.09□□□□□ -0.31
USE1-206ENST00000595101 MBOAT4Q96T53 435 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 AASSQ9UDR5 926 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 PURGQ9UJV8 347 aaKnown RBP13.09□□□□□ -0.31
USE1-206ENST00000595101 ERICH4A6NGS2 130 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 E9PQ18 207 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 PSMD9O00233 223 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 TIMM8AO60220 97 aaPredicted RBP13.09□□□□□ -0.31
USE1-206ENST00000595101 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 ZNF81P51508 661 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 TPTEP56180 551 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 SLC35D3Q5M8T2 416 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 C10orf67Q8IYJ2 551 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 RFLNBQ8N5W9 214 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 OR2AE1Q8NHA4 323 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 UBASH3BQ8TF42 649 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 RNF133Q8WVZ7 376 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 NEU4Q8WWR8 484 aaPredicted RBP13.09□□□□□ -0.31
USE1-206ENST00000595101 TTTY10Q9BZA0 68 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 BPESC1Q9GZL8 116 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 TREM2Q9NZC2 230 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 DNAJC27Q9NZQ0 273 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 COPS3Q9UNS2 423 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 CACNG2Q9Y698 323 aa13.09□□□□□ -0.31
USE1-206ENST00000595101 VWC2LB2RUY7 222 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 CDC14BO60729 498 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 OPRL1P41146 370 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 RGS6P49758 472 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 PDLIM4P50479 330 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 GK2Q14410 553 aaPredicted RBP13.08□□□□□ -0.32
USE1-206ENST00000595101 FBXW12Q6X9E4 464 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 ZBTB49Q6ZSB9 765 aa13.08□□□□□ -0.32
USE1-206ENST00000595101 MEPCEQ7L2J0 689 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms