RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ALG12Q9BV10 488 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 OR52D1Q9H346 318 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 NELFAQ9H3P2 528 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 NRIP3Q9NQ35 241 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 IL20RAQ9UHF4 553 aa17.13■□□□□ 0.33
LSM4-203ENST00000593829 DHHO43323 396 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 LOXP28300 417 aaPredicted RBP17.12■□□□□ 0.33
LSM4-203ENST00000593829 SDC2P34741 201 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 MAP2K3P46734 347 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 WNT4P56705 351 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 CCDC58Q4VC31 144 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 ZNF627Q7L945 461 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 TCEANCQ8N8B7 351 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 TMEM163Q8TC26 289 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 FOXB1Q99853 325 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 PPP1R3EQ9H7J1 279 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 RBFOX1Q9NWB1 397 aaKnown RBP17.12■□□□□ 0.33
LSM4-203ENST00000593829 ABCA12Q86UK0 2595 aa17.12■□□□□ 0.33
LSM4-203ENST00000593829 ARPC4-TTLL3A0A0A6YYG9 625 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 FAM157BP0CG42 384 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 NCMAPQ5T1S8 102 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 GPR139Q6DWJ6 353 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 MZT2BQ6NZ67 158 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 PLET1Q6UQ28 207 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 ZNF813Q6ZN06 617 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 FAM122BQ7Z309 247 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 CCDC36Q8IYA8 594 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 Q96M85 177 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 HS3ST6Q96QI5 342 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 COQ7Q99807 217 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 H3BN98 237 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 XKRYO14609 159 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 ARHGEF9O43307 516 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 SLC6A6P31641 620 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 ZNF83P51522 516 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 PYDC2Q56P42 97 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 ZNF620Q6ZNG0 422 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 ZNF767PQ75MW2 155 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 SAMD8Q96LT4 415 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 RBP7Q96R05 134 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 C1QTNF6Q9BXI9 259 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 GSTK1Q9Y2Q3 226 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 IER3IP1Q9Y5U9 82 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 TACC2O95359 2948 aa17.11■□□□□ 0.33
LSM4-203ENST00000593829 DPRXA6NFQ7 191 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 ZNF780AO75290 641 aaPredicted RBP17.1■□□□□ 0.33
LSM4-203ENST00000593829 SOX14O95416 240 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 GSTM3P21266 225 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 SDHAP31040 664 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 GABRA5P31644 462 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 TGM4P49221 684 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 ZNF84P51523 738 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 ZNF133P52736 654 aaPredicted RBP17.1■□□□□ 0.33
LSM4-203ENST00000593829 P2RX3P56373 397 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 CDK5Q00535 292 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 BSPH1Q075Z2 132 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 RAB40BQ12829 278 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 THEM4Q5T1C6 240 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 C10orf128Q5T292 105 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 C22orf42Q6IC83 251 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 RPL13AP3Q6NVV1 102 aa17.1■□□□□ 0.33
LSM4-203ENST00000593829 ZNF582Q96NG8 517 aaPredicted RBP17.1■□□□□ 0.33
LSM4-203ENST00000593829 TEX13CA0A0J9YWL9 993 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 A0A1W2PPR1 153 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 PRKYO43930 277 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 CD3EP07766 207 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 IGFBP1P08833 259 aaPredicted RBP17.09■□□□□ 0.33
LSM4-203ENST00000593829 CLEC2LP0C7M8 214 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 APEHP13798 732 aaKnown RBP17.09■□□□□ 0.33
LSM4-203ENST00000593829 B4GALT1P15291 398 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 MYL12AP19105 171 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 ETV1P50549 477 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 RAB25P57735 213 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 MXD1Q05195 221 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 MESTQ5EB52 335 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 FAM209AQ5JX71 171 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 TMEM108Q6UXF1 575 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 RASSF6Q6ZTQ3 369 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 YIPF7Q8N8F6 280 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 IFT27Q9BW83 186 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 PLEKHF2Q9H8W4 249 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 TMEM38BQ9NVV0 291 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 EXOSC1Q9Y3B2 195 aaKnown RBP17.09■□□□□ 0.33
LSM4-203ENST00000593829 CDH10Q9Y6N8 788 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 PRR14LQ5THK1 2151 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 TRDV1A0A1B0GX56 115 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 SNTNA6NMZ2 147 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 M0R1B8 84 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 SLC2A10O95528 541 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 TXNDC12O95881 172 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 CFL1P23528 166 aaKnown RBP17.09■□□□□ 0.33
LSM4-203ENST00000593829 CAPZA2P47755 286 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 CD83Q01151 205 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 FMODQ06828 376 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 RASD2Q96D21 266 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 ERMAPQ96PL5 475 aaPredicted RBP17.09■□□□□ 0.33
LSM4-203ENST00000593829 MARVELD1Q9BSK0 173 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 RNF115Q9Y4L5 304 aa17.09■□□□□ 0.33
LSM4-203ENST00000593829 HRNRQ86YZ3 2850 aaPredicted RBP17.08■□□□□ 0.33
LSM4-203ENST00000593829 LINC00854A0A1B0GVQ3 168 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms