RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-213ENST00000593254 ARHGAP24Q8N264 748 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 LINC00471Q8N535 108 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 OR2Z1Q8NG97 314 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 OR9Q2Q8NGE9 314 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 OR4C15Q8NGM1 316 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-213ENST00000593254 APOBEC3DQ96AK3 386 aaPredicted RBP11.14□□□□□ -0.63
H3F3B-213ENST00000593254 GAL3ST1Q99999 423 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 TRIM15Q9C019 465 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 EGLN3Q9H6Z9 239 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 IL19Q9UHD0 177 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 CDH10Q9Y6N8 788 aa11.14□□□□□ -0.63
H3F3B-213ENST00000593254 ISPDA4D126 451 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 TNFRSF11BO00300 401 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 BHLHE40O14503 412 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 FAM107AO95990 144 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 IGHV2-70P01814 119 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 TNFRSF1AP19438 455 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 GGT2P36268 569 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 HNRNPA0Q13151 305 aaKnown RBP11.13□□□□□ -0.63
H3F3B-213ENST00000593254 SLC36A3Q495N2 470 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 CLEC12AQ5QGZ9 265 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 SLC35F1Q5T1Q4 408 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 LCN8Q6JVE9 175 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 SLC18B1Q6NT16 456 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 RPL13AP3Q6NVV1 102 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 FAHD2BQ6P2I3 314 aaPredicted RBP11.13□□□□□ -0.63
H3F3B-213ENST00000593254 SHQ1Q6PI26 577 aaKnown RBP11.13□□□□□ -0.63
H3F3B-213ENST00000593254 CFAP77Q6ZQR2 320 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 COLCA1Q6ZS62 124 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 C1orf229Q6ZS94 237 aaPredicted RBP11.13□□□□□ -0.63
H3F3B-213ENST00000593254 LINC00346Q8IVM7 164 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 ZNF283Q8N7M2 679 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 OR52L1Q8NGH7 329 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 OR52E2Q8NGJ4 325 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 OR5L1Q8NGL2 311 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 ITLN1Q8WWA0 313 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 FAHD2AQ96GK7 314 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 NSL1Q96IY1 281 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 DDOQ99489 341 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 RBM4Q9BWF3 364 aaKnown RBP11.13□□□□□ -0.63
H3F3B-213ENST00000593254 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 FN3KQ9H479 309 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 MAGIXQ9H6Y5 334 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 TMEM106BQ9NUM4 274 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 IL20Q9NYY1 176 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 CYB5R1Q9UHQ9 305 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 PCDHB10Q9UN67 800 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 NPTNQ9Y639 398 aa11.13□□□□□ -0.63
H3F3B-213ENST00000593254 A0A0G2JMP0 313 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 A0A0X1KG70 313 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 SURF4O15260 269 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 RGS9O75916 674 aaPredicted RBP11.12□□□□□ -0.63
H3F3B-213ENST00000593254 AVPP01185 164 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.12□□□□□ -0.63
H3F3B-213ENST00000593254 ECH1Q13011 328 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 TRIM25Q14258 630 aaKnown RBP11.12□□□□□ -0.63
H3F3B-213ENST00000593254 ZNF362Q5T0B9 420 aaPredicted RBP11.12□□□□□ -0.63
H3F3B-213ENST00000593254 OR2T2Q6IF00 324 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 RASSF6Q6ZTQ3 369 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 OR5AS1Q8N127 324 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 OR8G5Q8NG78 346 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 OR4M2Q8NGB6 313 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 OR8D4Q8NGM9 314 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 OR2V2Q96R30 315 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 SIGLEC11Q96RL6 698 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 ATF6BQ99941 703 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 C1QTNF5Q9BXJ0 243 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 TMPRSS13Q9BYE2 586 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 PNRC2Q9NPJ4 139 aaKnown RBP11.12□□□□□ -0.63
H3F3B-213ENST00000593254 MRPL22Q9NWU5 206 aaKnown RBP11.12□□□□□ -0.63
H3F3B-213ENST00000593254 UBAP1Q9NZ09 502 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 PPP1R3CQ9UQK1 317 aa11.12□□□□□ -0.63
H3F3B-213ENST00000593254 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 J3QLI3 93 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 EBAG9O00559 213 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 CCNB2O95067 398 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 GASTP01350 101 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 HLA-DQA2P01906 255 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 ACSM4P0C7M7 580 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 T-ENOLP0DO92 83 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 CALB2P22676 271 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 GATA3P23771 443 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 RBMXP38159 391 aaKnown RBP11.11□□□□□ -0.63
H3F3B-213ENST00000593254 MS4A2Q01362 244 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 TMEM155Q4W5P6 130 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 DHFR2Q86XF0 187 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 TEX29Q8N6K0 151 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 CYB561A3Q8NBI2 242 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 OR2AJ1Q8NGZ0 328 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
H3F3B-213ENST00000593254 ZNF582Q96NG8 517 aaPredicted RBP11.11□□□□□ -0.63
H3F3B-213ENST00000593254 PITX2Q99697 317 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms