RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CCNIQ14094 377 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 Q6ZR03 302 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 HS3ST5Q8IZT8 346 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 ELMOD3Q96FG2 381 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 C1QTNF5Q9BXJ0 243 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 EGLN1Q9GZT9 426 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 CACNG2Q9Y698 323 aa23.12■■□□□ 1.29
SMAD4-213ENST00000591914 WNT9BO14905 357 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 GYPBP06028 91 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 CLUP10909 449 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 PSKH1P11801 424 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 ZNF3P17036 446 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 IGFBP5P24593 272 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 RPS27P42677 84 aaKnown RBP23.11■■□□□ 1.29
SMAD4-213ENST00000591914 CDH15P55291 814 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 HLXQ14774 488 aaPredicted RBP23.11■■□□□ 1.29
SMAD4-213ENST00000591914 PCK2Q16822 640 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 HFEQ30201 348 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 IQCF1Q8N6M8 205 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 LINC01356Q8N9X3 169 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 OR10S1Q8NGN2 331 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 WDR76Q9H967 626 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 PTTG3PQ9NZH4 202 aa23.11■■□□□ 1.29
SMAD4-213ENST00000591914 FMO3P31513 532 aa23.1■■□□□ 1.29
SMAD4-213ENST00000591914 ZNF511Q8NB15 262 aa23.1■■□□□ 1.29
SMAD4-213ENST00000591914 NARFLQ9H6Q4 476 aa23.1■■□□□ 1.29
SMAD4-213ENST00000591914 ZNF556Q9HAH1 456 aa23.1■■□□□ 1.29
SMAD4-213ENST00000591914 DDX28Q9NUL7 540 aaKnown RBP23.1■■□□□ 1.29
SMAD4-213ENST00000591914 LPAR3Q9UBY5 353 aa23.1■■□□□ 1.29
SMAD4-213ENST00000591914 TANC2Q9HCD6 1990 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 CUBNO60494 3623 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 KIAA1324LA8MWY0 1029 aaPredicted RBP23.09■■□□□ 1.29
SMAD4-213ENST00000591914 F5H5K5 113 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 ANXA8P13928 327 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 PRKACGP22612 351 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 TNFAIP6P98066 277 aaPredicted RBP23.09■■□□□ 1.29
SMAD4-213ENST00000591914 SPRNQ5BIV9 151 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 TEX30Q5JUR7 227 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 LINC01590Q5TEZ4 76 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 SLC27A4Q6P1M0 643 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 HCAR1Q9BXC0 346 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 MMADHCQ9H3L0 296 aaPredicted RBP23.09■■□□□ 1.29
SMAD4-213ENST00000591914 NTN4Q9HB63 628 aa23.09■■□□□ 1.29
SMAD4-213ENST00000591914 CLDN25C9JDP6 229 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 OSMP13725 252 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 ENTPD1P49961 510 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 BLVRAP53004 296 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 LMO4P61968 165 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 ACSM5Q6NUN0 579 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 SHQ1Q6PI26 577 aaKnown RBP23.08■■□□□ 1.29
SMAD4-213ENST00000591914 OR2Z1Q8NG97 314 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 NRBF2Q96F24 287 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 BEX2Q9BXY8 128 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 SHARPINQ9H0F6 387 aa23.08■■□□□ 1.29
SMAD4-213ENST00000591914 FAM183AA6NL82 134 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 DEAF1O75398 565 aaPredicted RBP23.07■■□□□ 1.28
SMAD4-213ENST00000591914 TNFSF4P23510 183 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 POU1F1P28069 291 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 OTX1P32242 354 aaPredicted RBP23.07■■□□□ 1.28
SMAD4-213ENST00000591914 TPTEP56180 551 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 MVKQ03426 396 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 GINS1Q14691 196 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 AVPI1Q5T686 147 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 OR2T2Q6IF00 324 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 DCXRQ7Z4W1 244 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 NAA40Q86UY6 237 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 OR6K6Q8NGW6 343 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 CCL17Q92583 94 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 SPTSSAQ969W0 71 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 UTP4Q969X6 686 aaKnown RBP23.07■■□□□ 1.28
SMAD4-213ENST00000591914 MED20Q9H944 212 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 TREM2Q9NZC2 230 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 WIPI2Q9Y4P8 454 aa23.07■■□□□ 1.28
SMAD4-213ENST00000591914 B4DSR2 109 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 M0R135 149 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 ZNF593O00488 134 aaPredicted RBP23.06■■□□□ 1.28
SMAD4-213ENST00000591914 TIPRLO75663 272 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 SPARCP09486 303 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 FAM157CP0CG43 387 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 FAM120AOSQ5T036 256 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 OR5AS1Q8N127 324 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 OR8G5Q8NG78 346 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 ZNF799Q96GE5 643 aa23.06■■□□□ 1.28
SMAD4-213ENST00000591914 LCATP04180 440 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 CDK5Q00535 292 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 SLC3A1Q07837 685 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 ATG16L2Q8NAA4 619 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 ST7LQ8TDW4 575 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 DNAJC9Q8WXX5 260 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 RAB1CQ92928 201 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 TIMD4Q96H15 378 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 IL19Q9UHD0 177 aa23.05■■□□□ 1.28
SMAD4-213ENST00000591914 IQCF6A8MYZ5 107 aa23.04■■□□□ 1.28
SMAD4-213ENST00000591914 FAM157AC9JC47 383 aa23.04■■□□□ 1.28
SMAD4-213ENST00000591914 SURF4O15260 269 aa23.04■■□□□ 1.28
SMAD4-213ENST00000591914 PAICSP22234 425 aaKnown RBP23.04■■□□□ 1.28
SMAD4-213ENST00000591914 DVL1P1P54792 670 aaPredicted RBP23.04■■□□□ 1.28
SMAD4-213ENST00000591914 GK2Q14410 553 aaPredicted RBP23.04■■□□□ 1.28
SMAD4-213ENST00000591914 FAHD1Q6P587 224 aa23.04■■□□□ 1.28
SMAD4-213ENST00000591914 SLAMF6Q96DU3 332 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms