RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 IGLV3-9A0A075B6K5 115 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 A0A1W2PRG6 482 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 IRGMA1A4Y4 181 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 SAC3D1A6NKF1 404 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 CENPBD1B2RD01 187 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 C11orf98E9PRG8 122 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 SLC16A6O15403 523 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 DHHO43323 396 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 CDC14BO60729 498 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 RP2O75695 350 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 LYPD3O95274 346 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 HMGN1P05114 100 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 TNFRSF1BP20333 461 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 FPR3P25089 353 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 GCH1P30793 250 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 GUCA1AP43080 201 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-226ENST00000591534 UCP2P55851 309 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 CLRN1P58418 232 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 MVKQ03426 396 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 HSF2Q03933 536 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 TSPAN31Q12999 210 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 LSAMPQ13449 338 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 PIN1Q13526 163 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-226ENST00000591534 ZMAT1Q5H9K5 638 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 KDM4DQ6B0I6 523 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 C1orf94Q6P1W5 598 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 WDR88Q6ZMY6 472 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 LHFPL2Q6ZUX7 228 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 C1QL2Q7Z5L3 287 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 C8orf59Q8N0T1 100 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-226ENST00000591534 GALNT4Q8N4A0 578 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 FAM86B1Q8N7N1 296 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 TEX47Q8TBZ9 253 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 TMEM239Q8WW34 195 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 YIPF5Q969M3 257 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 MAP6Q96JE9 813 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 ADI1Q9BV57 179 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 ANKRD60Q9BZ19 345 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 CDIP1Q9H305 208 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 SAP30LQ9HAJ7 183 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 VCX3AQ9NNX9 186 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 DDX28Q9NUL7 540 aaKnown RBP8.04□□□□□ -1.12
BRCA1-226ENST00000591534 TMEM38BQ9NVV0 291 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 IMPAD1Q9NX62 359 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF224Q9NZL3 707 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 MYEF2Q9P2K5 600 aaKnown RBP8.04□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF229Q9UJW7 825 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 A4GNTQ9UNA3 340 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 U3KQV3 271 aa8.04□□□□□ -1.12
BRCA1-226ENST00000591534 CPSF4LA6NMK7 179 aaKnown RBP8.03□□□□□ -1.12
BRCA1-226ENST00000591534 MCIDASD6RGH6 385 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 PLPP2O43688 288 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 IDH3BO43837 385 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 MRPS14O60783 128 aaKnown RBP8.03□□□□□ -1.12
BRCA1-226ENST00000591534 NCR1O76036 304 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 TNFAIP8O95379 198 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 CH25HO95992 272 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 MT-ND1P03886 318 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 QDPRP09417 244 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 OSMP13725 252 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 FUT4P22083 530 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 MAGEB1P43366 347 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 DAP3P51398 398 aaKnown RBP8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF81P51508 661 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 RPL11P62913 178 aaKnown RBP8.03□□□□□ -1.12
BRCA1-226ENST00000591534 FOXL1Q12952 345 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF74Q16587 644 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ALKBH6Q3KRA9 238 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF718Q3SXZ3 478 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 MEDAGQ5VYS4 303 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 LPCAT4Q643R3 524 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ARL9Q6T311 187 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 NHLRC1Q6VVB1 395 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 TMPRSS11FQ6ZWK6 438 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 NANOGNBQ7Z5D8 188 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ZNF584Q8IVC4 421 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 AQP11Q8NBQ7 271 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 OR4K5Q8NGD3 323 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 OR4C15Q8NGM1 316 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 OR52J3Q8NH60 311 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 SLC7A13Q8TCU3 470 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ST7LQ8TDW4 575 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 TFAP2CQ92754 450 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 DIRC2Q96SL1 478 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 FEVQ99581 238 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 SH3GL3Q99963 347 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 GAL3ST1Q99999 423 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 GABARAPL3Q9BY60 117 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 ZMAT3Q9HA38 289 aaKnown RBP8.03□□□□□ -1.12
BRCA1-226ENST00000591534 CCNB1IP1Q9NPC3 277 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 G6PC2Q9NQR9 355 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 SLC7A7Q9UM01 511 aa8.03□□□□□ -1.12
BRCA1-226ENST00000591534 LOC105371242A0A075B767 164 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 LOC100130705A0A1B0GUX0 176 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 H3BN98 237 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 CLPTM1O96005 669 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 IFNGP01579 166 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 IGHV3-13P01766 116 aa8.02□□□□□ -1.13
BRCA1-226ENST00000591534 PATE4P0C8F1 98 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms