RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 RASSF2P50749 326 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 GZMMP51124 257 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 PRSS12P56730 875 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 ZNF181Q2M3W8 571 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 OR1F12Q8NHA8 337 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 GATAD2BQ8WXI9 593 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 WACQ9BTA9 647 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
DDX39A-216ENST00000591275 POLR2J3Q9H1A7 115 aaKnown RBP13.2□□□□□ -0.3
DDX39A-216ENST00000591275 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-216ENST00000591275 WDR76Q9H967 626 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 ACOXLQ9NUZ1 547 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 BAG5Q9UL15 447 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 TMCC3Q9ULS5 477 aa13.2□□□□□ -0.3
DDX39A-216ENST00000591275 ZNF879B4DU55 563 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 P2RY10O00398 339 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 ALX3O95076 343 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 IRF2P14316 349 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 MMP9P14780 707 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 RPL15P61313 204 aaKnown RBP13.19□□□□□ -0.3
DDX39A-216ENST00000591275 AQP6Q13520 282 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 FHL1Q13642 323 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 CCDC92Q53HC0 331 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-216ENST00000591275 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 OR5L1Q8NGL2 311 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 OR13C2Q8NGS9 318 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 RASD2Q96D21 266 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 RERGLQ9H628 205 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 UFSP2Q9NUQ7 469 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 CTSZQ9UBR2 303 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 ADAM18Q9Y3Q7 739 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 NOTCH3Q9UM47 2321 aa13.19□□□□□ -0.3
DDX39A-216ENST00000591275 A0A0U1RQK1 487 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 RER1O15258 196 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 CCDC22O60826 627 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 FSTL3O95633 263 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 PRB2P02812 416 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-216ENST00000591275 CTLA4P16410 223 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 FPR3P25089 353 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 RPL4P36578 427 aaKnown RBP13.18□□□□□ -0.3
DDX39A-216ENST00000591275 PSMB10P40306 273 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 RGS6P49758 472 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 MESTQ5EB52 335 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 METTL21CQ5VZV1 264 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 Q6ZSV7 163 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 OAFQ86UD1 273 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 NRMQ8IXM6 262 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 PDZD9Q8IXQ8 264 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 LHX4Q969G2 390 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 Q96M85 177 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 TRIM15Q9C019 465 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 GRHPRQ9UBQ7 328 aa13.18□□□□□ -0.3
DDX39A-216ENST00000591275 IGHV1-69DA0A0B4J2H0 117 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 TEX13CA0A0J9YWL9 993 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 IQCF6A8MYZ5 107 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 EFCAB9A8MZ26 197 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 G3V4G9 280 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 XKRYO14609 159 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 FAM20BO75063 409 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 IGHV1-69P01742 117 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 IER3P46695 156 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 ST3GAL3Q11203 375 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 MAB21L1Q13394 359 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 KRT72Q14CN4 511 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 C2orf68Q2NKX9 166 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 RABL3Q5HYI8 236 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 PRAMEF6Q5VXH4 476 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 CD276Q5ZPR3 534 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 SFRP4Q6FHJ7 346 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-216ENST00000591275 NANOGP8Q6NSW7 305 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 BOLLQ8N9W6 283 aaKnown RBP13.17□□□□□ -0.3
DDX39A-216ENST00000591275 SCCPDHQ8NBX0 429 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 OR11L1Q8NGX0 322 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 APOBEC3DQ96AK3 386 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-216ENST00000591275 MYLK2Q9H1R3 596 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 RASSF4Q9H2L5 321 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 MRGBPQ9NV56 204 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 RHCGQ9UBD6 479 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 A4GNTQ9UNA3 340 aa13.17□□□□□ -0.3
DDX39A-216ENST00000591275 COA3Q9Y2R0 106 aaPredicted RBP13.17□□□□□ -0.3
DDX39A-216ENST00000591275 PRSS37A4D1T9 235 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 C3orf80F5H4A9 247 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 J3QW42 95 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 IMPA2O14732 288 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 SLC16A7O60669 478 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 GATA4P43694 442 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 YAP1P46937 504 aaKnown RBP13.16□□□□□ -0.3
DDX39A-216ENST00000591275 SLC9A3P48764 834 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 NPY4RP50391 375 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 MPPED2Q15777 294 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 CLEC12AQ5QGZ9 265 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 METTL11BQ5VVY1 283 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-216ENST00000591275 ZSCAN4Q8NAM6 433 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-216ENST00000591275 TPD52L3Q96J77 140 aa13.16□□□□□ -0.3
DDX39A-216ENST00000591275 PRRC1Q96M27 445 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms