RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 MELTFP08582 738 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF20P17024 532 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 SDHBP21912 280 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 CLDN6P56747 220 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 ZBTB37Q5TC79 503 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 CFAP77Q6ZQR2 320 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 RPS19BP1Q86WX3 136 aaKnown RBP17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 C1orf210Q8IVY1 113 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 TMEM156Q8N614 296 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 PAQR8Q8TEZ7 354 aa17.01■□□□□ 0.31
PRKCSH-209ENST00000589838 EML6Q6ZMW3 1958 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 TNRC18O15417 2968 aaPredicted RBP17■□□□□ 0.31
PRKCSH-209ENST00000589838 LOC101059948A0A1B0GTJ6 334 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF814B7Z6K7 855 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 CD3DP04234 171 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 CELA2AP08217 269 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 LIFP15018 202 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 GRB2P62993 217 aaKnown RBP17■□□□□ 0.31
PRKCSH-209ENST00000589838 OR51S1Q8NGJ8 323 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 OR1J2Q8NGS2 313 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 CCDC107Q8WV48 283 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 FAM46BQ96A09 425 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 CLEC4MQ9H2X3 399 aaPredicted RBP17■□□□□ 0.31
PRKCSH-209ENST00000589838 B3GNT2Q9NY97 397 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 ELF5Q9UKW6 265 aaPredicted RBP17■□□□□ 0.31
PRKCSH-209ENST00000589838 LAMA1P25391 3075 aa17■□□□□ 0.31
PRKCSH-209ENST00000589838 B4E171 279 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 RAB3DO95716 219 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 CYB5AP00167 134 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 GP1BAP07359 652 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 TSPAN7P41732 249 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 CLDN17P56750 224 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 CSNK2A1P68400 391 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 LGALSLQ3ZCW2 172 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 TEX261Q6UWH6 196 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 OR4D6Q8NGJ1 314 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 SLC25A21Q9BQT8 299 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 ALX4Q9H161 411 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 CNTD2Q9H8S5 307 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 HPF1Q9NWY4 346 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 DKKL1Q9UK85 242 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 SLC5A6Q9Y289 635 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 U3KQ87 197 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 MEIS3P1A6NDR6 274 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 OR2A4O95047 310 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 CDAP32320 146 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 MLF1P58340 268 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 LSM6P62312 80 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 H3F3AP84243 136 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF529Q6P280 563 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 PGAP1Q75T13 922 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 MAML2Q8IZL2 1156 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 OR8S1Q8NH09 359 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 NTNG2Q96CW9 530 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 ADAT3Q96EY9 351 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 OR2A7Q96R45 310 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 NKX3-1Q99801 234 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 B3GNT4Q9C0J1 378 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 EXO5Q9H790 373 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 GLTPQ9NZD2 209 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 RHBDD3Q9Y3P4 386 aa16.99■□□□□ 0.31
PRKCSH-209ENST00000589838 PHF3Q92576 2039 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 A0A1B0GTI1 187 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 VSIG10L2P0DP72 767 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 CCL3P10147 92 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF17P17021 662 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 CSNK1A1P48729 337 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 GSK3AP49840 483 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 MFAP5Q13361 173 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 RAET1LQ5VY80 246 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 ARMC10Q8N2F6 343 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 OR4D10Q8NGI6 311 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 OR51E1Q8TCB6 317 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 CHIAQ9BZP6 476 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 SH2D2AQ9NP31 389 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 ASH2LQ9UBL3 628 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 FBLN5Q9UBX5 448 aa16.98■□□□□ 0.31
PRKCSH-209ENST00000589838 GJE1A6NN92 205 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 CBR3O75828 277 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ICAM2P13598 275 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF81P51508 661 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 PRKXP51817 358 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 TSPAN5P62079 268 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 DHODHQ02127 395 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 POU4F3Q15319 338 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 OR52N4Q8NGI2 321 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ASB13Q8WXK3 278 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 NUDT16L1Q9BRJ7 211 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF160Q9HCG1 818 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF736B4DX44 427 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 RAMP1O60894 148 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 IFNA7P01567 189 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ITGB2P05107 769 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF121P58317 390 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 MEF2DQ14814 521 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 DOK3Q7L591 496 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 COMMD2Q86X83 199 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF584Q8IVC4 421 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 FTMTQ8N4E7 242 aa16.97■□□□□ 0.31
PRKCSH-209ENST00000589838 ZNF680Q8NEM1 530 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms