RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 SEMA6DQ8NFY4 1073 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 OR10G2Q8NGC3 310 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 OR5L1Q8NGL2 311 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 NANPQ8TBE9 248 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 GIPC3Q8TF64 312 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
MBD1-220ENST00000589758 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 TMEM106BQ9NUM4 274 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 UBAP1Q9NZ09 502 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 POLR1DQ9Y2S0 133 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
MBD1-220ENST00000589758 PPIAL4EA0A075B759 164 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 PPIAL4CA0A0B4J2A2 164 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 PPIAL4DF5H284 164 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 IGHV2-70P01814 119 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 SBK2P0C263 348 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 PPIAL4FP0DN26 164 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 HOXB6P17509 224 aaKnown RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 CDKN2AP42771 156 aaKnown RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 HILS1P60008 231 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 TMEM155Q4W5P6 130 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 CCDC92Q53HC0 331 aaPredicted RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 CLEC12AQ5QGZ9 265 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 SLC27A4Q6P1M0 643 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 C12orf54Q6X4T0 127 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 ZNF620Q6ZNG0 422 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 PTCHD4Q6ZW05 846 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 HS3ST5Q8IZT8 346 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 SPICQ8N5J4 248 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 ZNF283Q8N7M2 679 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 PAPD5Q8NDF8 572 aaKnown RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 COQ7Q99807 217 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 SUCNR1Q9BXA5 334 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 HDHD2Q9H0R4 259 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 PDP1Q9P0J1 537 aaPredicted RBP12.13□□□□□ -0.47
MBD1-220ENST00000589758 DNAJB9Q9UBS3 223 aa12.13□□□□□ -0.47
MBD1-220ENST00000589758 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 IFNL4K9M1U5 179 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 ARPC3O15145 178 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 RER1O15258 196 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 SOX14O95416 240 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 RENP00797 406 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 PRKACGP22612 351 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 NOS3P29474 1203 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 CENPAP49450 140 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 HIST1H3AP68431 136 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 LCN2P80188 198 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 SPRNQ5BIV9 151 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 SLC35F1Q5T1Q4 408 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 FBXW12Q6X9E4 464 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 JAZF1Q86VZ6 243 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 LRRC28Q86X40 367 aaPredicted RBP12.12□□□□□ -0.47
MBD1-220ENST00000589758 OR52L1Q8NGH7 329 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 FEVQ99581 238 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 NIPSNAP1Q9BPW8 284 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 TBC1D23Q9NUY8 699 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 PPP1R3CQ9UQK1 317 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 CDH10Q9Y6N8 788 aa12.12□□□□□ -0.47
MBD1-220ENST00000589758 DYSFO75923 2080 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 FPR2P25090 351 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 SLC36A3Q495N2 470 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 OTPQ5XKR4 325 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 LEG1Q6P5S2 330 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 Q6ZR03 302 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 RASSF6Q6ZTQ3 369 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 ATG16L2Q8NAA4 619 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 OR8D4Q8NGM9 314 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 OR4K13Q8NH42 304 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 FAM216AQ8WUB2 273 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 OR2V2Q96R30 315 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 RBM4Q9BWF3 364 aaKnown RBP12.11□□□□□ -0.47
MBD1-220ENST00000589758 TSSK6Q9BXA6 273 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 DGCR6LQ9BY27 220 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 PLA2G12AQ9BZM1 189 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 NTN4Q9HB63 628 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 PATZ1Q9HBE1 687 aaKnown RBP12.11□□□□□ -0.47
MBD1-220ENST00000589758 SRA1Q9HD15 236 aaKnown RBP12.11□□□□□ -0.47
MBD1-220ENST00000589758 DCAF16Q9NXF7 216 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 B9D1Q9UPM9 204 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 POLR3KQ9Y2Y1 108 aaPredicted RBP12.11□□□□□ -0.47
MBD1-220ENST00000589758 AP4S1Q9Y587 144 aa12.11□□□□□ -0.47
MBD1-220ENST00000589758 IDH3BO43837 385 aa12.1□□□□□ -0.47
MBD1-220ENST00000589758 DBHP09172 617 aa12.1□□□□□ -0.47
MBD1-220ENST00000589758 HIST1H1CP16403 213 aaKnown RBP12.1□□□□□ -0.47
MBD1-220ENST00000589758 ADRA2CP18825 462 aa12.1□□□□□ -0.47
MBD1-220ENST00000589758 CPT2P23786 658 aa12.1□□□□□ -0.47
MBD1-220ENST00000589758 SRP9P49458 86 aaKnown RBP12.1□□□□□ -0.47
MBD1-220ENST00000589758 BTG1P62324 171 aa12.1□□□□□ -0.47
MBD1-220ENST00000589758 ACTG1P63261 375 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms