RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 COLCA1Q6ZS62 124 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 RHOUQ7L0Q8 258 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 C19orf18Q8NEA5 215 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 OR8B3Q8NGG8 313 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 APOBEC3DQ96AK3 386 aaPredicted RBP13.46□□□□□ -0.25
RAB3D-202ENST00000589655 PLEKHA8Q96JA3 519 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 ZNF582Q96NG8 517 aaPredicted RBP13.46□□□□□ -0.25
RAB3D-202ENST00000589655 OR8B2Q96RD0 313 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 NUAK2Q9H093 628 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 MARCH7Q9H992 704 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 NRIP3Q9NQ35 241 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 C1RLQ9NZP8 487 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 SIGLEC7Q9Y286 467 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.25
RAB3D-202ENST00000589655 PRKDCP78527 4128 aaKnown RBP13.45□□□□□ -0.26
RAB3D-202ENST00000589655 SDHAP31040 664 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 CDKN2AP42771 156 aaKnown RBP13.45□□□□□ -0.26
RAB3D-202ENST00000589655 GATA4P43694 442 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 RAG2P55895 527 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 KRTAP27-1Q3LI81 207 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 FIP1L1Q6UN15 594 aaKnown RBP13.45□□□□□ -0.26
RAB3D-202ENST00000589655 Q6YL49 198 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 OR5L1Q8NGL2 311 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 SLC7A13Q8TCU3 470 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 LZICQ8WZA0 190 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 FAM46AQ96IP4 442 aaKnown RBP13.45□□□□□ -0.26
RAB3D-202ENST00000589655 TSSK2Q96PF2 358 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 GPX7Q96SL4 187 aaPredicted RBP13.45□□□□□ -0.26
RAB3D-202ENST00000589655 CITED1Q99966 193 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 CHIAQ9BZP6 476 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 CLN8Q9UBY8 286 aa13.45□□□□□ -0.26
RAB3D-202ENST00000589655 HMGB1P1B2RPK0 211 aaPredicted RBP13.44□□□□□ -0.26
RAB3D-202ENST00000589655 SOCS2O14508 198 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 PHYHO14832 338 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 KNG1P01042 644 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 SFTPBP07988 381 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 PSMB10P40306 273 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 RAD23AP54725 363 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 SF3A3Q12874 501 aaKnown RBP eCLIP13.44□□□□□ -0.265e-7■■■■■ 61.6
RAB3D-202ENST00000589655 CLEC12AQ5QGZ9 265 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 CGB2Q6NT52 195 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 CORO6Q6QEF8 472 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 DCDC5Q6ZRR9 648 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 CBLL1Q75N03 491 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 NLRC3Q7RTR2 1065 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 SLC15A3Q8IY34 581 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 Q8TCH9 128 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 ZDHHC16Q969W1 377 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 COQ7Q99807 217 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 CTSZQ9UBR2 303 aa13.44□□□□□ -0.26
RAB3D-202ENST00000589655 A0A1B0GUS0 222 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 LRRC30A6NM36 301 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 FAM20BO75063 409 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 NDUFB2O95178 105 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 NDUFA7O95182 113 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 ZNF682O95780 498 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 MELTFP08582 738 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 MMP9P14780 707 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 FPR3P25089 353 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 GK2Q14410 553 aaPredicted RBP13.43□□□□□ -0.26
RAB3D-202ENST00000589655 MPPED2Q15777 294 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 IFI44LQ53G44 452 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 ZNF362Q5T0B9 420 aaPredicted RBP13.43□□□□□ -0.26
RAB3D-202ENST00000589655 OLFML2AQ68BL7 652 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 GPR139Q6DWJ6 353 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.43□□□□□ -0.26
RAB3D-202ENST00000589655 NAA40Q86UY6 237 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 C1orf87Q8N0U7 546 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 HSH2DQ96JZ2 352 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 TBX15Q96SF7 602 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 HDHD2Q9H0R4 259 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 BEX1Q9HBH7 125 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 NOX4Q9NPH5 578 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 TMEM100Q9NV29 134 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 GID8Q9NWU2 228 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 TMCC3Q9ULS5 477 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 IER3IP1Q9Y5U9 82 aa13.43□□□□□ -0.26
RAB3D-202ENST00000589655 IGLV1-36A0A0B4J1U3 117 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 A0A0G2JK05 382 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 CXCR6O00574 342 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 FCN3O75636 299 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 TXNDC12O95881 172 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 ACSM4P0C7M7 580 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 ANOS1P23352 680 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 CFHR2P36980 270 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 OMPP47874 163 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 LIPEQ05469 1076 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 COX10Q12887 443 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 GPR157Q5UAW9 335 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 PRAMEF6Q5VXH4 476 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 CFAP77Q6ZQR2 320 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 ADCK1Q86TW2 530 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 GJC3Q8NFK1 279 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 RCN3Q96D15 328 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 PCGF1Q9BSM1 259 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 ANKRD19PQ9H560 264 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 RPS6KA6Q9UK32 745 aa13.42□□□□□ -0.26
RAB3D-202ENST00000589655 TMEM5Q9Y2B1 443 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms