RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 LINC00346Q8IVM7 164 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 DNAJC9Q8WXX5 260 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 PTP4A1Q93096 173 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 NRBF2Q96F24 287 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 PITX2Q99697 317 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 ATF6BQ99941 703 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 ZNF556Q9HAH1 456 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 SAP30LQ9HAJ7 183 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 ZNF275Q9NSD4 429 aaPredicted RBP11.8□□□□□ -0.52
ERCC1-208ENST00000589165 SVEP1Q4LDE5 3571 aa11.8□□□□□ -0.52
ERCC1-208ENST00000589165 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 DEAF1O75398 565 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 CD55P08174 381 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 OSMP13725 252 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 ZNF3P17036 446 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 FMO3P31513 532 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 GPR6P46095 362 aaPredicted RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 CDK5R2Q13319 367 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 TEX30Q5JUR7 227 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 SHQ1Q6PI26 577 aaKnown RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 HIPK1Q86Z02 1210 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 HS3ST5Q8IZT8 346 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 OR9Q1Q8NGQ5 310 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 CMBLQ96DG6 245 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 MSI2Q96DH6 328 aaKnown RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 MAP6Q96JE9 813 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 C1QTNF5Q9BXJ0 243 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 EGLN1Q9GZT9 426 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 PURGQ9UJV8 347 aaKnown RBP11.79□□□□□ -0.52
ERCC1-208ENST00000589165 COMMD3-BMI1R4GMX3 469 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 ATRQ13535 2644 aa11.79□□□□□ -0.52
ERCC1-208ENST00000589165 IGHV1-69-2A0A0G2JMI3 117 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 TVP23AA6NH52 213 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 SPRY3O43610 288 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 ACSM4P0C7M7 580 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 PRKACGP22612 351 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 TRIP10Q15642 601 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 TSTQ16762 297 aaKnown RBP11.78□□□□□ -0.52
ERCC1-208ENST00000589165 LINC01590Q5TEZ4 76 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 SLC27A4Q6P1M0 643 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 USP51Q70EK9 711 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 ELMOD3Q96FG2 381 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 ZNF184Q99676 751 aaPredicted RBP11.78□□□□□ -0.52
ERCC1-208ENST00000589165 PKP2Q99959 881 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 WDR76Q9H967 626 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 MSL2Q9HCI7 577 aa11.78□□□□□ -0.52
ERCC1-208ENST00000589165 LOC100289279A0A1B0GTE1 492 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.52
ERCC1-208ENST00000589165 PPIHO43447 177 aaKnown RBP11.77□□□□□ -0.52
ERCC1-208ENST00000589165 TIPRLO75663 272 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 HMGN1P05114 100 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 GYPBP06028 91 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 ZNF16P17020 682 aaPredicted RBP11.77□□□□□ -0.52
ERCC1-208ENST00000589165 PEX2P28328 305 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 OTX1P32242 354 aaPredicted RBP11.77□□□□□ -0.52
ERCC1-208ENST00000589165 ENTPD1P49961 510 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 CDK5Q00535 292 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 GINS1Q14691 196 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 HFEQ30201 348 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 FAM166AQ6J272 317 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 ACSM5Q6NUN0 579 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 LYPD4Q6UWN0 246 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 IQCF1Q8N6M8 205 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 ATG16L2Q8NAA4 619 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 ZNF511Q8NB15 262 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 OR10S1Q8NGN2 331 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 SOX7Q9BT81 388 aa11.77□□□□□ -0.52
ERCC1-208ENST00000589165 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■■□□□ 14.1
ERCC1-208ENST00000589165 F5H5K5 113 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 ZNF593O00488 134 aaPredicted RBP11.76□□□□□ -0.53
ERCC1-208ENST00000589165 LMX1BO60663 402 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 CDC14BO60729 498 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 CLUP10909 449 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 PSKH1P11801 424 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 FCGR1AP12314 374 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 PAICSP22234 425 aaKnown RBP11.76□□□□□ -0.53
ERCC1-208ENST00000589165 POU1F1P28069 291 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 IL2RGP31785 369 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 RPS27P42677 84 aaKnown RBP11.76□□□□□ -0.53
ERCC1-208ENST00000589165 TPTEP56180 551 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 HLXQ14774 488 aaPredicted RBP11.76□□□□□ -0.53
ERCC1-208ENST00000589165 ATP6AP1Q15904 470 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 FAHD1Q6P587 224 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 Q6ZR03 302 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 DCXRQ7Z4W1 244 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 PARP8Q8N3A8 854 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 SPTSSAQ969W0 71 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 HCAR1Q9BXC0 346 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 MARCH7Q9H992 704 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 PTTG3PQ9NZH4 202 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 CDC42EP3Q9UKI2 254 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 KCNS2Q9ULS6 477 aa11.76□□□□□ -0.53
ERCC1-208ENST00000589165 FAM183AA6NL82 134 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms