RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MLNRO43193 412 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 HSD17B1P14061 328 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 SELEP16581 610 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 ZNF12P17014 697 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 FPR3P25089 353 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 FPR2P25090 351 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 RRM2P31350 389 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 MDH2P40926 338 aaKnown RBP12.04□□□□□ -0.48
VMP1-206ENST00000587945 COMPP49747 757 aaPredicted RBP12.04□□□□□ -0.48
VMP1-206ENST00000587945 COX10Q12887 443 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 KLF17Q5JT82 389 aaPredicted RBP12.04□□□□□ -0.48
VMP1-206ENST00000587945 FAM201AQ5SY85 155 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 SLC35F1Q5T1Q4 408 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 SLC18B1Q6NT16 456 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 PGM2L1Q6PCE3 622 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 NAA40Q86UY6 237 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 BCL6BQ8N143 479 aaPredicted RBP12.04□□□□□ -0.48
VMP1-206ENST00000587945 SIGLECL1Q8N7X8 197 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 SDR9C7Q8NEX9 313 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 MCUR1Q96AQ8 359 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 NSMCE2Q96MF7 247 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 CDRT15Q96T59 188 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 PITX2Q99697 317 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 SLC30A2Q9BRI3 323 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 ZNF69Q9UC07 566 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 CD300AQ9UGN4 299 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 MAGEL2Q9UJ55 1249 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 POLR3KQ9Y2Y1 108 aaPredicted RBP12.04□□□□□ -0.48
VMP1-206ENST00000587945 PPIAL4AQ9Y536 164 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 INSIG2Q9Y5U4 225 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 AUP1Q9Y679 476 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
VMP1-206ENST00000587945 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 HLA-DQA2P01906 255 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 HLA-DPB1P04440 258 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 FABP3P05413 133 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 WNT2P09544 360 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 ACSM4P0C7M7 580 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 NOS3P29474 1203 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 GGT2P36268 569 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 PMELP40967 661 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 GSSP48637 474 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 SRP9P49458 86 aaKnown RBP12.03□□□□□ -0.48
VMP1-206ENST00000587945 UBA52P62987 128 aaKnown RBP12.03□□□□□ -0.48
VMP1-206ENST00000587945 KRTAP27-1Q3LI81 207 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 ESCO2Q56NI9 601 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 ARMCX4Q5H9R4 360 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 SAMD4BQ5PRF9 694 aaKnown RBP12.03□□□□□ -0.48
VMP1-206ENST00000587945 CLEC12AQ5QGZ9 265 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 SLC27A4Q6P1M0 643 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 COLCA1Q6ZS62 124 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 ZBTB46Q86UZ6 589 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 MOGAT3Q86VF5 341 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 PGAM4Q8N0Y7 254 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 POP5Q969H6 163 aaKnown RBP12.03□□□□□ -0.48
VMP1-206ENST00000587945 DUX5Q96PT3 197 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 CDADC1Q9BWV3 514 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 TMEM165Q9HC07 324 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 ARL8BQ9NVJ2 186 aa12.03□□□□□ -0.48
VMP1-206ENST00000587945 MRPL22Q9NWU5 206 aaKnown RBP12.03□□□□□ -0.48
VMP1-206ENST00000587945 IGHV3OR16-10A0A075B7F0 116 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 A8MXK9 166 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 PYCR1P32322 319 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 RPS27P42677 84 aaKnown RBP12.02□□□□□ -0.49
VMP1-206ENST00000587945 GK2Q14410 553 aaPredicted RBP12.02□□□□□ -0.49
VMP1-206ENST00000587945 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 ZNF620Q6ZNG0 422 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 CPLX4Q7Z7G2 160 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 CYB561A3Q8NBI2 242 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 OR2AJ1Q8NGZ0 328 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 GNPDA2Q8TDQ7 276 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 HCAR1Q9BXC0 346 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 NSRP1Q9H0G5 558 aaKnown RBP12.02□□□□□ -0.49
VMP1-206ENST00000587945 EGLN3Q9H6Z9 239 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 IL1RAPQ9NPH3 570 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 PNRC2Q9NPJ4 139 aaKnown RBP12.02□□□□□ -0.49
VMP1-206ENST00000587945 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
VMP1-206ENST00000587945 TMEM100Q9NV29 134 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 OR5V1Q9UGF6 321 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 CYB5R1Q9UHQ9 305 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 NUP50Q9UKX7 468 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 TMCC3Q9ULS5 477 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 SOX21Q9Y651 276 aaPredicted RBP12.02□□□□□ -0.49
VMP1-206ENST00000587945 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
VMP1-206ENST00000587945 TENM1Q9UKZ4 2725 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 LCATP04180 440 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 RPS2P15880 293 aaKnown RBP12.01□□□□□ -0.49
VMP1-206ENST00000587945 ANOS1P23352 680 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 CD80P33681 288 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 IFNGR2P38484 337 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 GYS2P54840 703 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 HOXA4Q00056 320 aaPredicted RBP12.01□□□□□ -0.49
VMP1-206ENST00000587945 PAX8Q06710 450 aa12.01□□□□□ -0.49
VMP1-206ENST00000587945 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.01□□□□□ -0.49
VMP1-206ENST00000587945 TRAP1Q12931 704 aaKnown RBP12.01□□□□□ -0.49
VMP1-206ENST00000587945 TSPAN31Q12999 210 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms