RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 NGFP01138 241 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 IGHV2-70P01814 119 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 FUT1P19526 365 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 RBMXP38159 391 aaKnown RBP7.2□□□□□ -1.26
SDF2-204ENST00000587338 CSNK1A1P48729 337 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 CRISP1P54107 249 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 UCP2P55851 309 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 KRTAP10-3P60369 221 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 ADARB1P78563 741 aaKnown RBP7.2□□□□□ -1.26
SDF2-204ENST00000587338 IL5RAQ01344 420 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 COX10Q12887 443 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 TSPAN31Q12999 210 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 TAF9Q16594 264 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 DEFB112Q30KQ8 113 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 SLC36A3Q495N2 470 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 SPATA46Q5T0L3 261 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 TMEM236Q5W0B7 351 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 ZNF770Q6IQ21 691 aaPredicted RBP7.2□□□□□ -1.26
SDF2-204ENST00000587338 TMEM53Q6P2H8 277 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 C9orf139Q6ZV77 190 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 SLC22A24Q8N4F4 322 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 KLHL36Q8N4N3 616 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 SPICQ8N5J4 248 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 ADPRHL1Q8NDY3 354 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 OR1J1Q8NGS3 322 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 TEX47Q8TBZ9 253 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 TFAP2CQ92754 450 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 SGTBQ96EQ0 304 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 ZNF570Q96NI8 536 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 DIRC2Q96SL1 478 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 ASPNQ9BXN1 380 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 DGCR6LQ9BY27 220 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 C1orf198Q9H425 327 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 EGLN3Q9H6Z9 239 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 MARCH7Q9H992 704 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 C12orf10Q9HB07 376 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 MEPEQ9NQ76 525 aaPredicted RBP7.2□□□□□ -1.26
SDF2-204ENST00000587338 C20orf141Q9NUB4 165 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 TBC1D23Q9NUY8 699 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 C1RLQ9NZP8 487 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 LRCH1Q9Y2L9 728 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 NPTNQ9Y639 398 aa7.2□□□□□ -1.26
SDF2-204ENST00000587338 IGKV1D-42A0A075B6H8 117 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 ZSCAN5BA6NJL1 495 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 SRRM5B3KS81 715 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 LRRN3E7EW58 273 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 C3orf80F5H4A9 247 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 MS4A18H0YCH9 400 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 DENRO43583 198 aaKnown RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 NDUFA7O95182 113 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 FARS2O95363 451 aaKnown RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 PLATP00750 562 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 IGHV3-13P01766 116 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 PRB2P02812 416 aaPredicted RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 HIST1H2ABP04908 130 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 GNAO1P09471 354 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 SELEP16581 610 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 CCNOP22674 350 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 AHCYP23526 432 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 FPR3P25089 353 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 EPHA2P29317 976 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 CD80P33681 288 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 MPV17P39210 176 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 SLC6A9P48067 706 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 MMP15P51511 669 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 BIDP55957 195 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 ESRRGP62508 458 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 PUDPQ08623 228 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 PTGES3Q15185 160 aaKnown RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 MS4A18Q3C1V0 323 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 ESCO2Q56NI9 601 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 CLEC12AQ5QGZ9 265 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 C5orf46Q6UWT4 87 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 LINC00114Q6XXX2 140 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 BRD3OSQ6XYD6 125 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 Q6ZPA2 131 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 RASSF6Q6ZTQ3 369 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 HIST3H2AQ7L7L0 130 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 OAFQ86UD1 273 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 C8orf59Q8N0T1 100 aaPredicted RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 SETD9Q8NE22 299 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 OR1J2Q8NGS2 313 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 OR13C2Q8NGS9 318 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 OR51A7Q8NH64 312 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 FAM81AQ8TBF8 368 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 FANK1Q8TC84 345 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 IPCEF1Q8WWN9 437 aaPredicted RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 HIST1H2ACQ93077 130 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 SAMD8Q96LT4 415 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 APOL4Q9BPW4 351 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 SLC30A2Q9BRI3 323 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 TMEM43Q9BTV4 400 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 TSSK6Q9BXA6 273 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 GABARAPL3Q9BY60 117 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 CHIAQ9BZP6 476 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 PATZ1Q9HBE1 687 aaKnown RBP7.19□□□□□ -1.26
SDF2-204ENST00000587338 TCF7L1Q9HCS4 588 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.19□□□□□ -1.26
SDF2-204ENST00000587338 IMPAD1Q9NX62 359 aa7.19□□□□□ -1.26
SDF2-204ENST00000587338 IL20RAQ9UHF4 553 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms