RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 HSMCR30P0CW71 290 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 PPP3CBP16298 524 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 HSD11B1P28845 292 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 PSMB10P40306 273 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 RGS6P49758 472 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 NANOS3P60323 173 aaKnown RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 PLP2Q04941 152 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 MFGE8Q08431 387 aaPredicted RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 ALKBH1Q13686 389 aaKnown RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 CDSNQ15517 529 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 TSTQ16762 297 aaKnown RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 XKRXQ6PP77 449 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 DRAM2Q6UX65 266 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 SEZ6L2Q6UXD5 910 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 GPR141Q7Z602 305 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 CATSPERDQ86XM0 798 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 ZNF808Q8N4W9 903 aaPredicted RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 IL17RDQ8NFM7 739 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 CA5BP1Q8WTZ4 195 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 ITLN2Q8WWU7 325 aaPredicted RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 UFD1Q92890 307 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 ZNF799Q96GE5 643 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 POM121L2Q96KW2 1035 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 PGLYRP3Q96LB9 341 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 DCLRE1CQ96SD1 692 aaKnown RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 DOK1Q99704 481 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 NDUFB11Q9NX14 153 aa14.03□□□□□ -0.16
SS18-226ENST00000585241 SF3B6Q9Y3B4 125 aaKnown RBP14.03□□□□□ -0.16
SS18-226ENST00000585241 CHD6Q8TD26 2715 aa14.02□□□□□ -0.16
SS18-226ENST00000585241 LOC100509620A0A075B734 347 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 IQCMA0A1B0GVH7 501 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 TMEM269A0A1B0GVZ9 245 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 OR4C45A6NMZ5 311 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 LOC110117498-PIK3R3F6TDL0 507 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 ICMTO60725 284 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 RPP14O95059 124 aaKnown RBP14.02□□□□□ -0.17
SS18-226ENST00000585241 CELP19835 753 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 APEX1P27695 318 aaKnown RBP14.02□□□□□ -0.17
SS18-226ENST00000585241 KIR3DL2P43630 455 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 CX3CR1P49238 355 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 TPTEP56180 551 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 SORDQ00796 357 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 TFF3Q07654 80 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 TAB1Q15750 504 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 WDR38Q5JTN6 314 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 COLCA1Q6ZS62 124 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 SATL1Q86VE3 508 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 PRSS35Q8N3Z0 413 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 ZFP41Q8N8Y5 198 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 SLC7A6Q92536 515 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 FRRS1LQ9P0K9 344 aa14.02□□□□□ -0.17
SS18-226ENST00000585241 NUFIP1Q9UHK0 495 aaKnown RBP14.02□□□□□ -0.17
SS18-226ENST00000585241 A0A1W2PR80 420 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 GPRIN2O60269 458 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 DBHP09172 617 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 STOMP27105 288 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 GDI2P50395 445 aaKnown RBP14.01□□□□□ -0.17
SS18-226ENST00000585241 PRKXP51817 358 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 ZNF121P58317 390 aaPredicted RBP14.01□□□□□ -0.17
SS18-226ENST00000585241 HGFACQ04756 655 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 PPA1Q15181 289 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 LIPKQ5VXJ0 399 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 ZNF544Q6NX49 715 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 ZNF283Q8N7M2 679 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 MUCL1Q96DR8 90 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 LRRC46Q96FV0 321 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 KCNJ16Q9NPI9 418 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 BATF3Q9NR55 127 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 OR52A1Q9UKL2 312 aa14.01□□□□□ -0.17
SS18-226ENST00000585241 PRR14LQ5THK1 2151 aa14□□□□□ -0.17
SS18-226ENST00000585241 TRBV2A0A0J9YWF9 115 aa14□□□□□ -0.17
SS18-226ENST00000585241 NKX2-6A6NCS4 301 aa14□□□□□ -0.17
SS18-226ENST00000585241 TMEM212A6NML5 194 aa14□□□□□ -0.17
SS18-226ENST00000585241 F5H5K5 113 aa14□□□□□ -0.17
SS18-226ENST00000585241 J3QW42 95 aa14□□□□□ -0.17
SS18-226ENST00000585241 ZG16O60844 167 aa14□□□□□ -0.17
SS18-226ENST00000585241 ZFPL1O95159 310 aa14□□□□□ -0.17
SS18-226ENST00000585241 CLDN14O95500 239 aa14□□□□□ -0.17
SS18-226ENST00000585241 CELA3BP08861 270 aa14□□□□□ -0.17
SS18-226ENST00000585241 CD36P16671 472 aa14□□□□□ -0.17
SS18-226ENST00000585241 GABRA5P31644 462 aa14□□□□□ -0.17
SS18-226ENST00000585241 APLNRP35414 380 aa14□□□□□ -0.17
SS18-226ENST00000585241 IDH3GP51553 393 aaPredicted RBP14□□□□□ -0.17
SS18-226ENST00000585241 GALK2Q01415 458 aa14□□□□□ -0.17
SS18-226ENST00000585241 CD200R1LQ6Q8B3 271 aa14□□□□□ -0.17
SS18-226ENST00000585241 ARL9Q6T311 187 aa14□□□□□ -0.17
SS18-226ENST00000585241 C22orf34Q6ZV56 151 aa14□□□□□ -0.17
SS18-226ENST00000585241 MYPOPQ86VE0 399 aaPredicted RBP14□□□□□ -0.17
SS18-226ENST00000585241 ELMOD2Q8IZ81 293 aa14□□□□□ -0.17
SS18-226ENST00000585241 SLC30A7Q8NEW0 376 aa14□□□□□ -0.17
SS18-226ENST00000585241 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
SS18-226ENST00000585241 C1QTNF5Q9BXJ0 243 aa14□□□□□ -0.17
SS18-226ENST00000585241 PBOV1Q9GZY1 135 aa14□□□□□ -0.17
SS18-226ENST00000585241 RBM38Q9H0Z9 239 aaKnown RBP14□□□□□ -0.17
SS18-226ENST00000585241 SMIM31A0A1B0GVY4 71 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 DPPA5A6NC42 116 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 A6NHS1 94 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 AGFG2O95081 481 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 IGLV3-1P01715 115 aa13.99□□□□□ -0.17
SS18-226ENST00000585241 TTRP02766 147 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms