RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 CD47Q08722 323 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 PSG7Q13046 419 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 KPNB1Q14974 876 aaKnown RBP11.4□□□□□ -0.58
SS18-222ENST00000582792 ZMYND11Q15326 602 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 ZBED5Q49AG3 693 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 ZNF770Q6IQ21 691 aaPredicted RBP11.4□□□□□ -0.58
SS18-222ENST00000582792 SLC25A47Q6Q0C1 308 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 ZER1Q7Z7L7 766 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 OAFQ86UD1 273 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 OR52E2Q8NGJ4 325 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 HDAC2Q92769 488 aaKnown RBP11.4□□□□□ -0.58
SS18-222ENST00000582792 C4orf45Q96LM5 186 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 SAMD8Q96LT4 415 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 ELOVL3Q9HB03 270 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 OR5V1Q9UGF6 321 aa11.4□□□□□ -0.58
SS18-222ENST00000582792 GNGT2O14610 69 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 CDC42EP2O14613 210 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 CST2P09228 141 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 PPIAL4GP0DN37 164 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 TNFSF4P23510 183 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 FASP25445 335 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 LAP3P28838 519 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 CD80P33681 288 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 TSPAN31Q12999 210 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 FHL1Q13642 323 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 ATP6AP1Q15904 470 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 ESCO2Q56NI9 601 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 PGBD2Q6P3X8 592 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 ARL9Q6T311 187 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 CD300LDQ6UXZ3 194 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 PARP8Q8N3A8 854 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 LRRC75AQ8NAA5 344 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 MOSPD2Q8NHP6 518 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 TMIGD2Q96BF3 282 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 FAM46AQ96IP4 442 aaKnown RBP11.39□□□□□ -0.59
SS18-222ENST00000582792 SIGLEC11Q96RL6 698 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 GPX7Q96SL4 187 aaPredicted RBP11.39□□□□□ -0.59
SS18-222ENST00000582792 DGCR6LQ9BY27 220 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 VNN3Q9NY84 501 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 LRCH1Q9Y2L9 728 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 TIMM10BQ9Y5J6 103 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 MMP24Q9Y5R2 645 aa11.39□□□□□ -0.59
SS18-222ENST00000582792 UNC119BA6NIH7 251 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 PLATP00750 562 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 GSTM3P21266 225 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 GPR4P46093 362 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 PCBD1P61457 104 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 PAX2Q02962 417 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 COX10Q12887 443 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 ALG10Q5BKT4 473 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 FAM205BPQ63HN1 556 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 ZNF774Q6NX45 483 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 C16orf87Q6PH81 154 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 Q6ZR03 302 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 FOXL2NBQ6ZUU3 175 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 CLDN22Q8N7P3 220 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 OR2Z1Q8NG97 314 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 GIPC3Q8TF64 312 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 UPRTQ96BW1 309 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 ALG12Q9BV10 488 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 TXNIPQ9H3M7 391 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 IL19Q9UHD0 177 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 IL20RAQ9UHF4 553 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 PPP1R3CQ9UQK1 317 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 SIGLEC7Q9Y286 467 aa11.38□□□□□ -0.59
SS18-222ENST00000582792 SOX21Q9Y651 276 aaPredicted RBP11.38□□□□□ -0.59
SS18-222ENST00000582792 IGHV3OR16-10A0A075B7F0 116 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 CEACAM18A8MTB9 384 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 TIPRLO75663 272 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 NDUFB2O95178 105 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 ABHD16AO95870 558 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 GPANK1O95872 356 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 WNT2P09544 360 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 KITLGP21583 273 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 TUBG1P23258 451 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 OMGP23515 440 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 CPT2P23786 658 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
SS18-222ENST00000582792 LAPTM4AQ15012 233 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 RASSF6Q6ZTQ3 369 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 SPATC1Q76KD6 591 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 JAZF1Q86VZ6 243 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 MUC20Q8N307 709 aaPredicted RBP11.37□□□□□ -0.59
SS18-222ENST00000582792 NPEPL1Q8NDH3 523 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 OR10G2Q8NGC3 310 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 OR13C2Q8NGS9 318 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 OR5K1Q8NHB7 308 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 FNDC8Q8TC99 324 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 ITLN1Q8WWA0 313 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 DNAJC9Q8WXX5 260 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 RBP7Q96R05 134 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 POFUT1Q9H488 388 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 TUBG2Q9NRH3 451 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
SS18-222ENST00000582792 NDRG4Q9ULP0 352 aaKnown RBP11.37□□□□□ -0.59
SS18-222ENST00000582792 TRAV27A0A087WT01 109 aa11.36□□□□□ -0.59
SS18-222ENST00000582792 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms