RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 JTBO76095 146 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 NQO2P16083 231 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 SNRPNP63162 240 aaKnown RBP19.41■□□□□ 0.7
PTPRM-211ENST00000580170 NKAIN1Q4KMZ8 207 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 SIGLECL1Q8N7X8 197 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 SLC38A9Q8NBW4 561 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 TJP1Q07157 1748 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 IFITM5A6NNB3 132 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 PRPH2P23942 346 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 SLC5A6Q9Y289 635 aa19.41■□□□□ 0.7
PTPRM-211ENST00000580170 POM121BA6NF01 834 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 UPK1AO00322 258 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 ADRA2CP18825 462 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF85Q03923 595 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 SELENBP1Q13228 472 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 STAC2Q6ZMT1 411 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 CMTM2Q8TAZ6 248 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 GLAP06280 429 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 NTF3P20783 257 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 CDK5R1Q15078 307 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 FXNQ16595 210 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 TRIM61Q5EBN2 209 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 OR2T2Q6IF00 324 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 PPP1R3CQ9UQK1 317 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 OR5H14A6NHG9 310 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 SEC14L6B5MCN3 397 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 RPS19BP1Q86WX3 136 aaKnown RBP19.4■□□□□ 0.7
PTPRM-211ENST00000580170 MFSD4AQ8N468 514 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 ATF6BQ99941 703 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 RHNO1Q9BSD3 238 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 S1PR5Q9H228 398 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 AUNIPQ9H7T9 357 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 A0A1W2PNR3 127 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 ZP3P21754 424 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 AQP6Q13520 282 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 ZNF626Q68DY1 528 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 LHFPL2Q6ZUX7 228 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 CRLF2Q9HC73 371 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 MRPS2Q9Y399 296 aaKnown RBP19.4■□□□□ 0.7
PTPRM-211ENST00000580170 TIMM10BQ9Y5J6 103 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 OR51B4Q9Y5P0 310 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 SDCBPO00560 298 aaPredicted RBP19.4■□□□□ 0.7
PTPRM-211ENST00000580170 VWA2Q5GFL6 755 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 COL13A1Q5TAT6 717 aaPredicted RBP19.4■□□□□ 0.7
PTPRM-211ENST00000580170 ZBTB37Q5TC79 503 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 OR4C5Q8NGB2 326 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 TMPRSS5Q9H3S3 457 aa19.4■□□□□ 0.7
PTPRM-211ENST00000580170 A0A1B0GTL3 188 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 hCG_1809904A0A1W2PP81 198 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 A0A1W2PPE2 198 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 A0A1W2PR64 198 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 A0A1W2PRV1 198 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 DEFA4P12838 97 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 CALCRP30988 508 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 FCGR2CP31995 323 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 OR8G1Q15617 311 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 TEX261Q6UWH6 196 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 SPACA5Q96QH8 159 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 FAM96BQ9Y3D0 163 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 U3KQ87 197 aa19.39■□□□□ 0.7
PTPRM-211ENST00000580170 CTXN2P0C2S0 81 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 GLI4P10075 376 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 CAMKMTQ7Z624 323 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 TCTE3Q8IZS6 198 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 OR2AE1Q8NHA4 323 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 GPR84Q9NQS5 396 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 KCND3Q9UK17 655 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 STRAPQ9Y3F4 350 aaKnown RBP19.39■□□□□ 0.69
PTPRM-211ENST00000580170 PHIPQ8WWQ0 1821 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 PRSS37A4D1T9 235 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 PPICP45877 212 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 GABRA4P48169 554 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 BTNL8Q6UX41 500 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 R4GMQ9 66 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 LRRC30A6NM36 301 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 TBXA2RP21731 343 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 PSMB6P28072 239 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 ZNF468Q5VIY5 522 aaPredicted RBP19.39■□□□□ 0.69
PTPRM-211ENST00000580170 UCN3Q969E3 161 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 MED18Q9BUE0 208 aa19.39■□□□□ 0.69
PTPRM-211ENST00000580170 TRBV5-4A0A0C4DH59 114 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 OR4E1P0C645 316 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 RPS27P42677 84 aaKnown RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 AGERQ15109 404 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 PTCRAQ6ISU1 281 aaPredicted RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 FGF20Q9NP95 211 aaPredicted RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 ARL2-SNX15V9GYD0 113 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 DVL1O14640 695 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 SSSCA1O60232 199 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 CD3DP04234 171 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 DVL1P1P54792 670 aaPredicted RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 MRPL58Q14197 206 aaKnown RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 SIRT6Q8N6T7 355 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 C16orf52Q8NHV5 167 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 ZMAT5Q9UDW3 170 aaKnown RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 ST6GAL1P15907 406 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 SELEP16581 610 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 EN2P19622 333 aaPredicted RBP19.38■□□□□ 0.69
PTPRM-211ENST00000580170 NUDCD2Q8WVJ2 157 aa19.38■□□□□ 0.69
PTPRM-211ENST00000580170 SLC35D1Q9NTN3 355 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms