RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 CCDC90BQ9GZT6 254 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 NIPAL2Q9H841 368 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 ISG20L2Q9H9L3 353 aaKnown RBP13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 KCNN3Q9UGI6 736 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 CAB39Q9Y376 341 aaPredicted RBP13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 DOPEY2Q9Y3R5 2298 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 CADP27708 2225 aa13.76□□□□□ -0.21
CSNK1D-212ENST00000580061 TMEM129A0AVI4 362 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 J3QLW9 94 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 ABCD4O14678 606 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 ICMTO60725 284 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 MRPS14O60783 128 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 TNFAIP8O95379 198 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 APOC1P02654 83 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 TACSTD2P09758 323 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF19P17023 458 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 LOXP28300 417 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 WNT5AP41221 380 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 CX3CR1P49238 355 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 NR1H2P55055 460 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 CDH15P55291 814 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 TPTEP56180 551 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 OR2G6Q5TZ20 316 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 LIPNQ5VXI9 398 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 DRAM2Q6UX65 266 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 FAM220AQ7Z4H9 259 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 NAA40Q86UY6 237 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 KLHL36Q8N4N3 616 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF283Q8N7M2 679 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 NANOGP1Q8N7R0 232 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 YIPF7Q8N8F6 280 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 OR52N1Q8NH53 320 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 C4orf45Q96LM5 186 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 NR1H4Q96RI1 486 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 DOK1Q99704 481 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 ACOXLQ9NUZ1 547 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 GNG8Q9UK08 70 aa13.75□□□□□ -0.21
CSNK1D-212ENST00000580061 MYL12BO14950 172 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 CD3EP07766 207 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 PCSK6P29122 969 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 PSMA6P60900 246 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 TMPRSS11AQ6ZMR5 421 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 COLCA1Q6ZS62 124 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 PRSS45Q7RTY3 260 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF485Q8NCK3 441 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 SPRYD4Q8WW59 207 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 PELI1Q96FA3 418 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 PIK3IP1Q96FE7 263 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 HS3ST6Q96QI5 342 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 KCNS3Q9BQ31 491 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 C1QTNF5Q9BXJ0 243 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF696Q9H7X3 374 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 ERGIC3Q9Y282 383 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 GRIP1Q9Y3R0 1128 aa13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 SPTAN1Q13813 2472 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 USP9YO00507 2555 aaPredicted RBP13.74□□□□□ -0.21
CSNK1D-212ENST00000580061 FASNP49327 2511 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 ATP6V1G2-DDX39BF2Z307 99 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 SMPD2O60906 423 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 RPP14O95059 124 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 PNPP00491 289 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 MT-ND5P03915 603 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 COX6B1P14854 86 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 SLC6A9P48067 706 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 MMP16P51512 607 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 WNT4P56705 351 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF121P58317 390 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 ADAM5Q6NVV9 412 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 ARL9Q6T311 187 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 ZNF101Q8IZC7 436 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 SPARTQ8N0X7 666 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 RORBQ92753 470 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 RADILQ96JH8 1075 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 TMEM204Q9BSN7 226 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 MND1Q9BWT6 205 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 FAM206AQ9NX38 181 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 EIF3KQ9UBQ5 218 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 PLEKHB1Q9UF11 243 aaPredicted RBP13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 RNF115Q9Y4L5 304 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 R4GMQ9 66 aa13.73□□□□□ -0.21
CSNK1D-212ENST00000580061 TMEM269A0A1B0GVZ9 245 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 A6NNC1 897 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 GOSR1O95249 250 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 NGFP01138 241 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 LCATP04180 440 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 ANXA2P07355 339 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 FAM157BP0CG42 384 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 SLC2A1P11166 492 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 NR4A1P22736 598 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 ANOS1P23352 680 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 COL8A1P27658 744 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 PSMB10P40306 273 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 RGS6P49758 472 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 UCP2P55851 309 aa13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 NKX6-1P78426 367 aaPredicted RBP13.72□□□□□ -0.21
CSNK1D-212ENST00000580061 MFGE8Q08431 387 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms