RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 UGT2B15P54855 530 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TAS2R41P59536 307 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 RPL18Q07020 188 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 HIST3H3Q16695 136 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 VMACQ2NL98 169 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 C11orf88Q6PI97 169 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 BOLLQ8N9W6 283 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 NPEPL1Q8NDH3 523 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TSPEARQ8WU66 669 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ASB10Q8WXI3 467 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 HAVCR1Q96D42 359 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SGTBQ96EQ0 304 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CLPTM1LQ96KA5 538 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ATP6V1G3Q96LB4 118 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PRSS27Q9BQR3 290 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 MRPL13Q9BYD1 178 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 MEPEQ9NQ76 525 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 INIPQ9NRY2 104 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CTSZQ9UBR2 303 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TIMM10BQ9Y5J6 103 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 U3KQK5 164 aa10.83□□□□□ -0.68
CDK5RAP3-213ENST00000579605 IGKV1D-43A0A0B4J1Z2 117 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ELOVL7A1L3X0 281 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PAHP00439 452 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 AQP2P41181 271 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 RBM34P42696 430 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 NPY4RP50391 375 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 GUCY1A3Q02108 690 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 FMODQ06828 376 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 DMRTC1Q5HYR2 192 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SFRP4Q6FHJ7 346 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR2T2Q6IF00 324 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CCDC80Q76M96 950 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CALHM3Q86XJ0 350 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR5R1Q8NH85 324 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PFN4Q8NHR9 129 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SEPHS2Q99611 448 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CITED2Q99967 270 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 INTS9Q9NV88 658 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 BAG5Q9UL15 447 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SH3GLB1Q9Y371 365 aa10.82□□□□□ -0.68
CDK5RAP3-213ENST00000579605 A0A1W2PRX2 142 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ADAM20O43506 726 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR10H3O60404 316 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ICMTO60725 284 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR5F1O95221 314 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 HOXD3P31249 432 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 RPL4P36578 427 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ZNF133P52736 654 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 DLX1P56177 255 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CD47Q08722 323 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CYLC2Q14093 348 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 C10orf128Q5T292 105 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 BTN2A1Q7KYR7 527 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 NDUFA11Q86Y39 141 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 NKAIN4Q8IVV8 208 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PNKDQ8N490 385 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 MOSPD2Q8NHP6 518 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TMEM255BQ8WV15 326 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TMEM239Q8WW34 195 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PTP4A1Q93096 173 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SH3GL1Q99961 368 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 POLR2J2Q9GZM3 115 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 POLR2J3Q9H1A7 115 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SMURF1Q9HCE7 757 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SIRT7Q9NRC8 400 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TBCCD1Q9NVR7 557 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 PTTG3PQ9NZH4 202 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ONECUT1Q9UBC0 465 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 RIMS3Q9UJD0 308 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 MED31Q9Y3C7 131 aa10.81□□□□□ -0.68
CDK5RAP3-213ENST00000579605 GMNCA6NCL1 334 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 E9PQ18 207 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 H3BUX3 64 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 IGF2P01344 180 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 IFNA14P01570 189 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 NR2C1P13056 603 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 TNFRSF1BP20333 461 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 EEF1B2P24534 225 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 GZMMP51124 257 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 CRYBA2P53672 197 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ZNF181Q2M3W8 571 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 KLHL22Q53GT1 634 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ARMC4Q5T2S8 1044 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 FAM27BQ5VT28 67 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 BHLHE23Q8NDY6 225 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 WFDC9Q8NEX5 89 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 OR8G5Q8NG78 346 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 HDAC2Q92769 488 aaKnown RBP10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 NKX3-1Q99801 234 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 ECSITQ9BQ95 431 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 SMURF2Q9HAU4 748 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 C20orf141Q9NUB4 165 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 UFSP2Q9NUQ7 469 aa10.8□□□□□ -0.68
CDK5RAP3-213ENST00000579605 A0A0G2JND7 137 aa10.79□□□□□ -0.68
CDK5RAP3-213ENST00000579605 MEIOCA2RUB1 952 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms