RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 MSX2P35548 267 aaPredicted RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 SRP9P49458 86 aaKnown RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 ERFP50548 548 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 MMP16P51512 607 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 HMGA2P52926 109 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 GNGT1P63211 74 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 MXRA7P84157 204 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 HLXQ14774 488 aaPredicted RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 ZMYND11Q15326 602 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 OR2T2Q6IF00 324 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 SLC18B1Q6NT16 456 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 PGBD2Q6P3X8 592 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 PIGWQ7Z7B1 504 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 OR5AS1Q8N127 324 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 ATG16L2Q8NAA4 619 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 POP5Q969H6 163 aaKnown RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 MEGF10Q96KG7 1140 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 PITX2Q99697 317 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 ATF6BQ99941 703 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 SLC30A2Q9BRI3 323 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 RBM4Q9BWF3 364 aaKnown RBP9.72□□□□□ -0.85
SSH2-208ENST00000579040 CDADC1Q9BWV3 514 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 HCAR1Q9BXC0 346 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 C1QTNF5Q9BXJ0 243 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 MUC13Q9H3R2 512 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 GCM1Q9NP62 436 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 ACTR3BQ9P1U1 418 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 OPN4Q9UHM6 478 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 CYB5R1Q9UHQ9 305 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 CDH10Q9Y6N8 788 aa9.72□□□□□ -0.85
SSH2-208ENST00000579040 OR6C68A6NDL8 312 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 FSTL3O95633 263 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 HLA-DQA2P01906 255 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 ACSM4P0C7M7 580 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 ZFP36P26651 326 aaKnown RBP9.71□□□□□ -0.86
SSH2-208ENST00000579040 GGT2P36268 569 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 MAGEA2P43356 314 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 SLC6A9P48067 706 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.71□□□□□ -0.86
SSH2-208ENST00000579040 TRAP1Q12931 704 aaKnown RBP9.71□□□□□ -0.86
SSH2-208ENST00000579040 ZNF181Q2M3W8 571 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
SSH2-208ENST00000579040 ESCO2Q56NI9 601 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 CFAP77Q6ZQR2 320 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 ZNF771Q7L3S4 317 aaPredicted RBP9.71□□□□□ -0.86
SSH2-208ENST00000579040 LINC00346Q8IVM7 164 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 ARHGAP24Q8N264 748 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 BPIFB2Q8N4F0 458 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 SDR9C7Q8NEX9 313 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 OR10AD1Q8NGE0 317 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 OR52E2Q8NGJ4 325 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 FAM216AQ8WUB2 273 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 TRIM15Q9C019 465 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 LRCH1Q9Y2L9 728 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 LYVE1Q9Y5Y7 322 aa9.71□□□□□ -0.86
SSH2-208ENST00000579040 SVEP1Q4LDE5 3571 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 TNFRSF11BO00300 401 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 BHLHE40O14503 412 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 MLNRO43193 412 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 ZNF12P17014 697 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 ADRA2CP18825 462 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 FPR2P25090 351 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 GATA4P43694 442 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 TPTEP56180 551 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 MALLQ13021 153 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 SLC35F1Q5T1Q4 408 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 C12orf54Q6X4T0 127 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 RASSF6Q6ZTQ3 369 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 C1orf87Q8N0U7 546 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 CELF2-AS1Q8N7Q2 184 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 DEFB108BQ8NET1 73 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 OR2T4Q8NH00 348 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 BTBD10Q9BSF8 475 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 FN3KQ9H479 309 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 MAGIXQ9H6Y5 334 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 EGLN3Q9H6Z9 239 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 PNRC2Q9NPJ4 139 aaKnown RBP9.7□□□□□ -0.86
SSH2-208ENST00000579040 TMEM100Q9NV29 134 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 MRPL22Q9NWU5 206 aaKnown RBP9.7□□□□□ -0.86
SSH2-208ENST00000579040 IL20Q9NYY1 176 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 OR5V1Q9UGF6 321 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 NOP16Q9Y3C1 178 aaKnown RBP9.7□□□□□ -0.86
SSH2-208ENST00000579040 NBEAL1Q6ZS30 2694 aa9.7□□□□□ -0.86
SSH2-208ENST00000579040 LRRC30A6NM36 301 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 CEACAM18A8MTB9 384 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 F5H5K5 113 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 CCNB2O95067 398 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 LCATP04180 440 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 ZNF823P16415 610 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 ATP6V1B2P21281 511 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 OTX1P32242 354 aaPredicted RBP9.69□□□□□ -0.86
SSH2-208ENST00000579040 COMPP49747 757 aaPredicted RBP9.69□□□□□ -0.86
SSH2-208ENST00000579040 ACTG1P63261 375 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 ZNF154Q13106 437 aa9.69□□□□□ -0.86
SSH2-208ENST00000579040 HNRNPA0Q13151 305 aaKnown RBP9.69□□□□□ -0.86
SSH2-208ENST00000579040 GK2Q14410 553 aaPredicted RBP9.69□□□□□ -0.86
SSH2-208ENST00000579040 ARMCX4Q5H9R4 360 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms