RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 LINC00518Q8N0U6 118 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR52N5Q8NH56 324 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR51E1Q8TCB6 317 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 PIGTQ969N2 578 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 SGK3Q96BR1 496 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR8B4Q96RC9 309 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 NUDT9Q9BW91 350 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 NECAP2Q9NVZ3 263 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 CXorf51AA0A1B0GTR3 108 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 C9orf170A2RU37 121 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 HTRA4P83105 476 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 TMEM41BQ5BJD5 291 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 WDR38Q5JTN6 314 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR5L1Q8NGL2 311 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 HSD17B8Q92506 261 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 NRSN2Q9GZP1 204 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 SLC5A6Q9Y289 635 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 CD96P40200 585 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 NKX2-1P43699 371 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 KCNJ3P48549 501 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF77Q15935 545 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 C4orf17Q53FE4 359 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 LAMTOR1Q6IAA8 161 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 MRM1Q6IN84 353 aaKnown RBP11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRR18Q8N4B5 295 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 C15orf54Q8N8G6 183 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 NKX2-4Q9H2Z4 354 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF275Q9NSD4 429 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 TMEM272A0A1B0GTI8 110 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 PHOX2AO14813 284 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 CST4P01036 141 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 SPP1P10451 314 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 MFAP5Q13361 173 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR2T2Q6IF00 324 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 ARRDC1Q8N5I2 433 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 COMMD1Q8N668 190 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 OTOSQ8NHW6 89 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 ABHD6Q9BV23 337 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZBP1Q9H171 429 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 ABI3Q9P2A4 366 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 THAP10Q9P2Z0 257 aaPredicted RBP11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 B9D1Q9UPM9 204 aa11.88□□□□□ -0.51
PCDHGB3-201ENST00000576222 CYB5BO43169 146 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 IL33O95760 270 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 GSTP1P09211 210 aaKnown RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 DPP4P27487 766 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 SLC25A1P53007 311 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 TAS2R30P59541 319 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 FAM78AQ5JUQ0 283 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 RGS7BPQ6MZT1 257 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 IL1F10Q8WWZ1 152 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 PIGCQ92535 297 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 PATZ1Q9HBE1 687 aaKnown RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 RASL12Q9NYN1 266 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 GDE1Q9NZC3 331 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 KCNIP1Q9NZI2 227 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 PCDHGA9Q9Y5G4 932 aaKnown RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 A0A0B4J293 547 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 A8MXE2 369 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRAMEF26H0Y7S4 382 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF133P52736 654 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 MIDNQ504T8 468 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 PLCXD3Q63HM9 321 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 MOB3CQ70IA8 216 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 H1FNTQ75WM6 255 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 ETFBKMTQ8IXQ9 262 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 SLAMF6Q96DU3 332 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 TCTN2Q96GX1 697 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 GAS2L1Q99501 681 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 ZCCHC4Q9H5U6 513 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 MIOXQ9UGB7 285 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 FAM74A7A6NL05 159 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 CEBPZOSA8MTT3 80 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 PPP5D1E7EU14 171 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 EIF4E2O60573 245 aaKnown RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 DFFBO76075 338 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 FAM74A3Q4VXF1 159 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 C19orf48Q6RUI8 117 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR11G2Q8NGC1 345 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 OR1E3Q8WZA6 343 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 TAAR8Q969N4 342 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 LIN37Q96GY3 246 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 C6orf106Q9H6K1 298 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 CUTCQ9NTM9 273 aa11.87□□□□□ -0.51
PCDHGB3-201ENST00000576222 POM121BA6NF01 834 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 PRAMEF25A6NGN4 478 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 HTD2P86397 168 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 C16orf52Q8NHV5 167 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 EMC6Q9BV81 110 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 MMP24Q9Y5R2 645 aa11.86□□□□□ -0.51
PCDHGB3-201ENST00000576222 A0A1W2PPV4 95 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms