RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 VGLL3A8MV65 326 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 PRR32B1ATL7 298 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SLC22A1O15245 554 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 DOK2O60496 412 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SELENOFO60613 162 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 APOL3O95236 402 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 RENP00797 406 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 HLA-DQA2P01906 255 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 MRPL3P09001 348 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 DANCRP0C864 163 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 LIMS3P0CW19 117 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 LIMS4P0CW20 117 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 CCNOP22674 350 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 PTAFRP25105 342 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 PSMB9P28065 219 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 THBS4P35443 961 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 NAA10P41227 235 aaPredicted RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 RGS6P49758 472 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 HCCSP53701 268 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 HSF2Q03933 536 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 GLO1Q04760 184 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ACSM1Q08AH1 577 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 MLLT11Q13015 90 aaPredicted RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SPCS2Q15005 226 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SSX1Q16384 188 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ARMCX4Q5H9R4 360 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 C11orf71Q6IPW1 123 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 LINC00299Q6ZSB3 139 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 MEPCEQ7L2J0 689 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 VASH1Q7L8A9 365 aaPredicted RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 CXXC5Q7LFL8 322 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SHFQ7M4L6 423 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ZBTB46Q86UZ6 589 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 CPOQ8IVL8 374 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 GLB1L2Q8IW92 636 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ZCCHC24Q8N2G6 241 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SLC30A7Q8NEW0 376 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 OR10S1Q8NGN2 331 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 NANOS1Q8WY41 292 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 PTP4A1Q93096 173 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ZMYND19Q96E35 227 aaPredicted RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 RNFT2Q96EX2 444 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 PERPQ96FX8 193 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 MAP6Q96JE9 813 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 MGLLQ99685 303 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SYT3Q9BQG1 590 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 MND1Q9BWT6 205 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 OR51V1Q9H2C8 321 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SIAEQ9HAT2 523 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 SLC24A3Q9HC58 644 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 PNRC2Q9NPJ4 139 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 CISD1Q9NZ45 108 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 WARS2Q9UGM6 360 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 CLEC2DQ9UHP7 191 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 GDF2Q9UK05 429 aaPredicted RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 EXOSC1Q9Y3B2 195 aaKnown RBP6.82□□□□□ -1.32
CCDC40-215ENST00000576033 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 HIVEP1P15822 2718 aa6.82□□□□□ -1.32
CCDC40-215ENST00000576033 TEP1Q99973 2627 aaKnown RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 C5orf49A4QMS7 147 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 SLC22A31A6NKX4 558 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 RIIAD1A6NNX1 92 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 NOL3O60936 208 aaKnown RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 FARS2O95363 451 aaKnown RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 NGFP01138 241 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 RAF1P04049 648 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 CST2P09228 141 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 SPARCP09486 303 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 INHBBP09529 407 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF35P13682 527 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 CD36P16671 472 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 ZNF3P17036 446 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 STOMP27105 288 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 ARR3P36575 388 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 MPV17P39210 176 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 HTR5AP47898 357 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 ETV1P50549 477 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 NKX6-1P78426 367 aaPredicted RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 TPBGQ13641 420 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 GGTLC2Q14390 218 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 SPHARQ15513 63 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 ADIPOQQ15848 244 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 MST1LQ2TV78 715 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 SLC36A2Q495M3 483 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 KLHL12Q53G59 568 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 FAM27BQ5VT28 67 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 SLC18B1Q6NT16 456 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 TMEM53Q6P2H8 277 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 OR52N1Q8NH53 320 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 DYNC2LI1Q8TCX1 351 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 FBXW5Q969U6 566 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 PLEKHA8Q96JA3 519 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 POM121L2Q96KW2 1035 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 TRAF4Q9BUZ4 470 aaPredicted RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 MRPL37Q9BZE1 423 aaKnown RBP6.81□□□□□ -1.32
CCDC40-215ENST00000576033 NGBQ9NPG2 151 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 OBP2BQ9NPH6 170 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 INPP5EQ9NRR6 644 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 CA10Q9NS85 328 aa6.81□□□□□ -1.32
CCDC40-215ENST00000576033 NDUFB11Q9NX14 153 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms