RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 ADRA2AP08913 450 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 HSD11B1P28845 292 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 PCSK6P29122 969 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 OTX1P32242 354 aaPredicted RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 THBS4P35443 961 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 GLRXP35754 106 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 RAD52P43351 418 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 TPTEP56180 551 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ERVS71-1P61550 626 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 GRB2P62993 217 aaKnown RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 ROM1Q03395 351 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 RAB40BQ12829 278 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 MSMPQ1L6U9 139 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 KLHL22Q53GT1 634 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ZNF322Q6U7Q0 402 aaPredicted RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 RFPL4BQ6ZWI9 263 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 RHOUQ7L0Q8 258 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 ZNF679Q8IYX0 411 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ZNF101Q8IZC7 436 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ACBD7Q8N6N7 88 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ZNF283Q8N7M2 679 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 OR1J1Q8NGS3 322 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ABHD4Q8TB40 342 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ASB17Q8WXJ9 295 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 SPTSSAQ969W0 71 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ZNF799Q96GE5 643 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ZNF649Q9BS31 505 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 BCL2L14Q9BZR8 327 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 Q9H521 79 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 UBTD1Q9HAC8 227 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 ELOVL3Q9HB03 270 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 FGF20Q9NP95 211 aaPredicted RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 CA10Q9NS85 328 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 TBCCD1Q9NVR7 557 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 MRM2Q9UI43 246 aaKnown RBP7.38□□□□□ -1.23
NUP88-211ENST00000575976 PSORS1C1Q9UIG5 152 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 IKZF2Q9UKS7 526 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 SPEF1Q9Y4P9 236 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 LRP12Q9Y561 859 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 PCDHGB1Q9Y5G3 927 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 NAV3Q8IVL0 2385 aa7.38□□□□□ -1.23
NUP88-211ENST00000575976 DAPL1A0PJW8 107 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 C5orf63A6NC05 138 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ICMTO60725 284 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ZNF254O75437 659 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 IGHA1P01876 353 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 LCATP04180 440 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 LCKP06239 509 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 SLC2A1P11166 492 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ANOS1P23352 680 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 APOBEC3AP31941 199 aaPredicted RBP7.37□□□□□ -1.23
NUP88-211ENST00000575976 SLC6A9P48067 706 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 CX3CR1P49238 355 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 FABP6P51161 128 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 RIDAP52758 137 aaKnown RBP7.37□□□□□ -1.23
NUP88-211ENST00000575976 PPP1CBP62140 327 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 CSNK2BP67870 215 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ACTC1P68032 377 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ACTA1P68133 377 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 MVKQ03426 396 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 EGR3Q06889 387 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 SNAI3Q3KNW1 292 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 SPATA46Q5T0L3 261 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ZNF684Q5T5D7 378 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 DEGS2Q6QHC5 323 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ARL9Q6T311 187 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 DRAM2Q6UX65 266 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 PLEKHG7Q6ZR37 379 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 COLCA1Q6ZS62 124 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 AHSA2Q719I0 299 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 LHFPL3Q86UP9 236 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ZNF611Q8N823 705 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 SLC25A40Q8TBP6 338 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 SNX33Q8WV41 574 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 TMEM171Q8WVE6 324 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 NRGNQ92686 78 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 FBXW5Q969U6 566 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 POM121Q96HA1 1249 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 TMEM80Q96HE8 168 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 DHRS9Q9BPW9 319 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 C1QTNF5Q9BXJ0 243 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 MROQ9BYG7 248 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 LIME1Q9H400 295 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 POFUT1Q9H488 388 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 ZNF442Q9H7R0 627 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 BRD7Q9NPI1 651 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 UBAP1Q9NZ09 502 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 FZR1Q9UM11 496 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 N6AMT1Q9Y5N5 214 aa7.37□□□□□ -1.23
NUP88-211ENST00000575976 PKDREJQ9NTG1 2253 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 MED13LQ71F56 2210 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 IRGMA1A4Y4 181 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 EFCAB10A6NFE3 127 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 METTL15A6NJ78 407 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 PTGES3LE9PB15 166 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 APOC1P02654 83 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 KRT8P05787 483 aa7.36□□□□□ -1.23
NUP88-211ENST00000575976 ANXA2P07355 339 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms