RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ZNF85Q03923 595 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 HGFACQ04756 655 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ZNF672Q499Z4 452 aaPredicted RBP14.75□□□□□ -0.05
NUP88-210ENST00000574867 RBM48Q5RL73 367 aaKnown RBP14.75□□□□□ -0.05
NUP88-210ENST00000574867 PLEKHG7Q6ZR37 379 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 AHSA2Q719I0 299 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 SSX6Q7RTT6 188 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ZNF786Q8N393 782 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 TMEM80Q96HE8 168 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 COG8Q96MW5 612 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 RHNO1Q9BSD3 238 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 LRRC42Q9Y546 428 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ATP23Q9Y6H3 246 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 PLAUP00749 431 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 MYL12AP19105 171 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 SLC6A9P48067 706 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 CX3CR1P49238 355 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 PSMA6P60900 246 aaKnown RBP14.75□□□□□ -0.05
NUP88-210ENST00000574867 ST3GAL4Q11206 333 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 GALEQ14376 348 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ZNF787Q6DD87 383 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 FAM220AQ7Z4H9 259 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 EGFL6Q8IUX8 553 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ZNF101Q8IZC7 436 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 STX19Q8N4C7 294 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ZNF283Q8N7M2 679 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 APOBEC3DQ96AK3 386 aaPredicted RBP14.75□□□□□ -0.05
NUP88-210ENST00000574867 ZNF442Q9H7R0 627 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 SP140LQ9H930 580 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 ERVK13-1Q9NX77 482 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 UBAP1Q9NZ09 502 aa14.75□□□□□ -0.05
NUP88-210ENST00000574867 EXOSC1Q9Y3B2 195 aaKnown RBP14.75□□□□□ -0.05
NUP88-210ENST00000574867 FAM157BP0CG42 384 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 TUBG1P23258 451 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 PRKXP51817 358 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 ZNF829Q3KNS6 432 aaPredicted RBP14.74□□□□□ -0.05
NUP88-210ENST00000574867 CDONQ4KMG0 1287 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 ZNF684Q5T5D7 378 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 HIST2H2BCQ6DN03 193 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 KCTD20Q7Z5Y7 419 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 ABHD4Q8TB40 342 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 AKAP1Q92667 903 aaKnown RBP eCLIP14.74□□□□□ -0.05
NUP88-210ENST00000574867 MYDGFQ969H8 173 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 ALG8Q9BVK2 526 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 C1QTNF5Q9BXJ0 243 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 TUBG2Q9NRH3 451 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 CA10Q9NS85 328 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 MRM2Q9UI43 246 aaKnown RBP14.74□□□□□ -0.05
NUP88-210ENST00000574867 ABCA4P78363 2273 aa14.74□□□□□ -0.05
NUP88-210ENST00000574867 METTL15A6NJ78 407 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 PSMD9O00233 223 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 CRHBPP24387 322 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 GLRXP35754 106 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 COLCA1Q6ZS62 124 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 RFPL4BQ6ZWI9 263 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 SYS1Q8N2H4 156 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 LILRB1Q8NHL6 650 aaPredicted RBP14.73□□□□□ -0.05
NUP88-210ENST00000574867 FBXW5Q969U6 566 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 CHCHD3Q9NX63 227 aaKnown RBP14.73□□□□□ -0.05
NUP88-210ENST00000574867 PCDHGB5Q9Y5G0 923 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 A0A1W2PPR1 153 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 HS3ST1O14792 307 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 TACSTD2P09758 323 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 SLC35A2P78381 396 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 ZNF544Q6NX49 715 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 YIPF7Q8N8F6 280 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 OR5L1Q8NGL2 311 aa14.73□□□□□ -0.05
NUP88-210ENST00000574867 CISD1Q9NZ45 108 aaKnown RBP14.73□□□□□ -0.05
NUP88-210ENST00000574867 VSTM5A8MXK1 200 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 H3BSA7 217 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 LCATP04180 440 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 LCKP06239 509 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 LIMS3P0CW19 117 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 LIMS4P0CW20 117 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 ZNF121P58317 390 aaPredicted RBP14.72□□□□□ -0.05
NUP88-210ENST00000574867 RGS7BPQ6MZT1 257 aaPredicted RBP14.72□□□□□ -0.05
NUP88-210ENST00000574867 LHFPL3Q86UP9 236 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 OR1J1Q8NGS3 322 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 TMEM171Q8WVE6 324 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 DHRS9Q9BPW9 319 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 ZNF649Q9BS31 505 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 YTHDF1Q9BYJ9 559 aaKnown RBP14.72□□□□□ -0.05
NUP88-210ENST00000574867 OR51B6Q9H340 312 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 DUSP21Q9H596 190 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 MOB1AQ9H8S9 216 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 GNG8Q9UK08 70 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 PLCE1Q9P212 2302 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 ACOD1A6NK06 481 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 E7EQL1 145 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 PTGES3LE9PB15 166 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 GPRIN2O60269 458 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 NGFP01138 241 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 CDK1P06493 297 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 ANXA2P07355 339 aaKnown RBP14.72□□□□□ -0.05
NUP88-210ENST00000574867 MMP16P51512 607 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 PPP1CBP62140 327 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 OR52H1Q8NGJ2 320 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 HAVCR2Q8TDQ0 301 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 NEUROG1Q92886 237 aa14.72□□□□□ -0.05
NUP88-210ENST00000574867 FAIMQ9NVQ4 179 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms