RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TGIF2LXQ8IUE1 241 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 OR9K2Q8NGE7 335 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 OR8U1Q8NH10 309 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 SEH1LQ96EE3 360 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 SAT2Q96F10 170 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ELOVL3Q9HB03 270 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 FBXO34Q9NWN3 711 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 KCNK6Q9Y257 313 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 VSIG4Q9Y279 399 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TRBV23OR9-2A0A075B6M9 112 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 A0A0A6YYD5 115 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TEX13DA0A0J9YY54 714 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM212A6NML5 194 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 OR52A4PA6NMU1 304 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 NPIPB9F8W1W9 429 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 GLCEO94923 617 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 PAX6P26367 422 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 CHATP28329 748 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 HRH1P35367 487 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 MECP2P51608 486 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF136P52737 540 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 UBE2KP61086 200 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 RNF4P78317 190 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 PMPCAQ10713 525 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TRMT12Q53H54 448 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ABHD17CQ6PCB6 329 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 PNLDC1Q8NA58 520 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 SLC30A7Q8NEW0 376 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF563Q8TA94 476 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 MITD1Q8WV92 249 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ASB17Q8WXJ9 295 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 SLCO5A1Q9H2Y9 848 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 NELFAQ9H3P2 528 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 A0A0A6YYH2 397 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 A6NJ64 397 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ITGA5P08648 1049 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TAGLN2P37802 199 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 RBMXP38159 391 aaKnown RBP8.63□□□□□ -1.03
CCDC40-212ENST00000574799 BCL6P41182 706 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 RASGEF1BQ0VAM2 473 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM196Q5HYL7 178 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 C1orf189Q5VU69 101 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 UNQ9370/PRO34162Q6UXP9 181 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 LRRC69Q6ZNQ3 347 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 FJX1Q86VR8 437 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 CSNK1A1LQ8N752 337 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 GVQW1Q8N7I0 195 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 GPX8Q8TED1 209 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 SLC39A7Q92504 469 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF426Q9BUY5 554 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 FRRS1LQ9P0K9 344 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 FBXL21Q9UKT6 434 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 SLC22A13Q9Y226 551 aa8.63□□□□□ -1.03
CCDC40-212ENST00000574799 BORCS7-ASMTA0A0B4J1R7 106 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 C1QTNF3-AMACRE9PGA6 284 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 FGF16O43320 207 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 NUDT14O95848 222 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 F10P00742 488 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 SLC35G6P0C7Q6 338 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TACR3P29371 465 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TAS2R60P59551 318 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 PRDX1Q06830 199 aaKnown RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 DUSP8Q13202 625 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TMPPEQ6ZT21 453 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ZNF610Q8N9Z0 462 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CPNE4Q96A23 557 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ELSPBP1Q96BH3 223 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 C14orf144Q96I85 54 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 IGFLR1Q9H665 355 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 SEBOXQ9HB31 216 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 LUZP4Q9P127 313 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CBY1Q9Y3M2 126 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM14AQ9Y6G1 99 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 EML5Q05BV3 1969 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 A0A1B0GTQ1 180 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 MSGN1A6NI15 193 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 C11orf98E9PRG8 122 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 LDB3O75112 727 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CEACAM5P06731 702 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CD14P08571 375 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 FOLR2P14207 255 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 GDI1P31150 447 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TSFMP43897 325 aaKnown RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TAS2R31P59538 309 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 PDGFRLQ15198 375 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 REC114Q7Z4M0 266 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 MDGA2Q7Z553 956 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ZSCAN4Q8NAM6 433 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 HSD17B11Q8NBQ5 300 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ADAD2Q8NCV1 583 aaKnown RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 TMEM104Q8NE00 496 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 ZPLD1Q8TCW7 415 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 CMBLQ96DG6 245 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
CCDC40-212ENST00000574799 SLC17A9Q9BYT1 436 aa8.62□□□□□ -1.03
CCDC40-212ENST00000574799 GPR61Q9BZJ8 451 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms