RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 UBE2NLQ5JXB2 153 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 SLC35D3Q5M8T2 416 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 DCST2Q5T1A1 773 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ZNF776Q68DI1 518 aaPredicted RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 PSRC1Q6PGN9 363 aaPredicted RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 BTN2A1Q7KYR7 527 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ABHD13Q7L211 337 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 VN1R4Q7Z5H5 301 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 VRK2Q86Y07 508 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 CDK20Q8IZL9 346 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 C9orf62Q8N4C0 152 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 LRRC17Q8N6Y2 441 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 LSMEM1Q8N8F7 131 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 Q8N9G6 341 aaPredicted RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR7G2Q8NG99 324 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR4F15Q8NGB8 312 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR4E2Q8NGC2 313 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR4M1Q8NGD0 313 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR4K14Q8NGD5 310 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR5W2Q8NH69 310 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR56B4Q8NH76 319 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 TMEM239Q8WW34 195 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 TMEM190Q8WZ59 177 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 CDS1Q92903 461 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 SMIM19Q96E16 107 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ZNF578Q96N58 590 aaPredicted RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 LRRC3BQ96PB8 259 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 OR2M4Q96R27 311 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 GPX7Q96SL4 187 aaPredicted RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 SDF2Q99470 211 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 UTP23Q9BRU9 249 aaKnown RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 TMED9Q9BVK6 235 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 LRRN3Q9H3W5 708 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ZDHHC4Q9NPG8 344 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 IMP3Q9NV31 184 aaKnown RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 COMMD3Q9UBI1 195 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 IL20RAQ9UHF4 553 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ELF5Q9UKW6 265 aaPredicted RBP4.2□□□□□ -1.74
CDC27-215ENST00000573550 SLC7A7Q9UM01 511 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ING4Q9UNL4 249 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 NCKAP1Q9Y2A7 1128 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 MED31Q9Y3C7 131 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 ETV7Q9Y603 341 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 SLC22A7Q9Y694 548 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 CACNG2Q9Y698 323 aa4.2□□□□□ -1.74
CDC27-215ENST00000573550 COL5A1P20908 1838 aaPredicted RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 MEIKINA0A087WXM9 373 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 A0A0G2JMP0 313 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 A0A0X1KG70 313 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 A0A1B0GUH1 482 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 DAPL1A0PJW8 107 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 A6NCN8 305 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 EFCAB7A8K855 629 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 CDC42EP2O14613 210 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 PDCD5O14737 125 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 ARPC3O15145 178 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 PGRMC2O15173 223 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 TO15178 435 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 FLRT2O43155 660 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 REM1O75628 298 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 ECDO95905 644 aaPredicted RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 CGAP01215 116 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 EIF4EP06730 217 aaKnown RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 TPOP07202 933 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 RAB40ALP0C0E4 278 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 OR2T7P0C7T2 308 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 SULT1A3P0DMM9 295 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 SULT1A4P0DMN0 295 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 LIFP15018 202 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 RAB3BP20337 219 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 DRD5P21918 477 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 FCARP24071 287 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 MAPK3P27361 379 aaPredicted RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 HTR2AP28223 471 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 CD79BP40259 229 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 HTR2BP41595 481 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 TNFRSF4P43489 277 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 FXYD6P3P58550 94 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 RPS4XP62701 263 aaKnown RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 CSTF1Q05048 431 aaKnown RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 PNRC1Q12796 327 aaPredicted RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 SGCGQ13326 291 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 KRT33BQ14525 404 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 NTRK2Q16620 822 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 DUSP5Q16690 384 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 KLHL12Q53G59 568 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 Q5BKY6 102 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 FAM78AQ5JUQ0 283 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 CLEC12AQ5QGZ9 265 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 MRPL2Q5T653 305 aaKnown RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 FAM205BPQ63HN1 556 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 OLFML2AQ68BL7 652 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 ZNF57Q68EA5 555 aaPredicted RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 LAMTOR1Q6IAA8 161 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 PLBD1Q6P4A8 553 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 RPL22L1Q6P5R6 122 aaKnown RBP4.19□□□□□ -1.74
CDC27-215ENST00000573550 LRRN1Q6UXK5 716 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 RTL4Q6ZR62 310 aa4.19□□□□□ -1.74
CDC27-215ENST00000573550 DNM1P46Q6ZS02 220 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms