RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 KIR2DS4P43632 304 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 RAB7AP51149 207 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 RND3P61587 244 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF45Q02386 682 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 OR2F1Q13607 317 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 PTGR1Q14914 329 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC1A5Q15758 541 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 HIST3H3Q16695 136 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 CEACAM21Q3KPI0 293 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 UNC50Q53HI1 259 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM27D1Q5T7N8 215 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 WDR25Q64LD2 544 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 MRGPREQ86SM8 312 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 FBXO16Q8IX29 292 aaPredicted RBP4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 LGI4Q8N135 537 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 CLDN22Q8N7P3 220 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 OR4D10Q8NGI6 311 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 HAVCR2Q8TDQ0 301 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 PDLIM2Q96JY6 352 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 DOK1Q99704 481 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 PDCD1LG2Q9BQ51 273 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 MAP1LC3AQ9H492 121 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF442Q9H7R0 627 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 NMUR1Q9HB89 426 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ESM1Q9NQ30 184 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM206AQ9NX38 181 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 TAS2R1Q9NYW7 299 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 OR52A1Q9UKL2 312 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ING4Q9UNL4 249 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 TP53TG1Q9Y2A0 90 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 NUBP2Q9Y5Y2 271 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 CPQQ9Y646 472 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 FNDC1Q4ZHG4 1894 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 A0A0G2JK05 382 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 MEIOCA2RUB1 952 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 ISPDA4D126 451 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 CLDN24A6NM45 220 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 SMKR1H3BMG3 65 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 ARPC5O15511 151 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 CST8O60676 142 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM20BO75063 409 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 DUSP11O75319 330 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 FKBP6O75344 327 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 CCNKO75909 580 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 TFPTP0C1Z6 253 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 CDH1P12830 882 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 DAOP14920 347 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 PVRP15151 417 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC2A5P22732 501 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 CALML3P27482 149 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 IFNGR2P38484 337 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 GLP1RP43220 463 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 ATP4BP51164 291 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 ESRRGP62508 458 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 RPL32P62910 135 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 BTN3A2P78410 334 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 ECH1Q13011 328 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 SKP2Q13309 424 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM187Q14656 261 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 NFATC4Q14934 902 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 TSNQ15631 228 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC25A35Q3KQZ1 300 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 PYCR3Q53H96 274 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 TPTE2P1Q5T6R2 138 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM71E1Q6IPT2 247 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF549Q6P9A3 640 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 C5orf46Q6UWT4 87 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 Q6ZSV7 163 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 OLIG3Q7RTU3 272 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 C10orf107Q8IVU9 208 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 LRRC25Q8N386 305 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 PNLDC1Q8NA58 520 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 OR2T33Q8NG76 320 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 GPR32P1Q8NGA4 272 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 OR10A6Q8NH74 314 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 TRUB1Q8WWH5 349 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 DYRK2Q92630 601 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 EEF1AKMT3Q96AZ1 226 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 C12orf43Q96C57 262 aaKnown RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 OR10C1Q96KK4 312 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM173AQ9BQD7 235 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 OVOL2Q9BRP0 275 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 MLST8Q9BVC4 326 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 PRORYQ9H606 182 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 REEP1Q9H902 201 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 MEPEQ9NQ76 525 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 VPS29Q9UBQ0 182 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 SEC14L4Q9UDX3 406 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 RWDD2AQ9UIY3 292 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 GNPTGQ9UJJ9 305 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 CES1P1Q9UKY3 287 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC7A11Q9UPY5 501 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 RFX7Q2KHR2 1363 aa4.22□□□□□ -1.73
TOPBP1-210ENST00000572787 FRMPD3Q5JV73 1810 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 OR6C6A6NF89 314 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TAAR5O14804 337 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TCAPO15273 167 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 ATP6V0E1O15342 81 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 FAM189A1O60320 539 aa4.21□□□□□ -1.74
TOPBP1-210ENST00000572787 TBX6O95947 436 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms